| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2160 |
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| Symbol | rpsH |
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| ID | 5135674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2311544 |
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| End bp | 2311936 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533616 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001218076 |
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| Protein GI | 147674032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000012701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCGAT TTCGGATATG CTGACCCGCA TTCGTAACGG TCAGGCAGCA
AACAAAGTTG CTGTAAAAAT GCCTTCTTCA AAGCTGAAAG TTGCAATTGC TGCACTTCTG
AAAGCAGAAG GTTATATCGC TGATTTCGCT GTTGAAGGCG AAGTGAAAGC AGAGCTGGAA
ATCACTCTTA AGTATTTCCA AGCAAAACCA GTAATCGAGC AAATCAAACG CGTTTCTCGT
CCAGGTCTTC GTGTTTACAA GAAGAAAGAC GAGCTGCCAT CTGTAATGGG TGGTCTAGGC
GTTGCTGTCG TTTCCACTTC CAAGGGTCTG ATGTCAGACC GCGCTGCTCG TAAAGCAGGT
CTTGGCGGTG AAATCATTTG CTACGTAGCA TAA
|
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| Protein sequence | MSMQDPISDM LTRIRNGQAA NKVAVKMPSS KLKVAIAALL KAEGYIADFA VEGEVKAELE
ITLKYFQAKP VIEQIKRVSR PGLRVYKKKD ELPSVMGGLG VAVVSTSKGL MSDRAARKAG
LGGEIICYVA
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