| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2154 |
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| Symbol | secY |
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| ID | 5136899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2308137 |
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| End bp | 2309471 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533610 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001218070 |
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| Protein GI | 147673663 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000317062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGAA AACCAGGACA AGATTTTCGT AGTGCTCAGA GCGGCTTAAG TAAACTGAAG
TCGCGCTTAT TCTTCGTAAT TGGTGCACTT TTAGTATTCC GAGCCGGCTC TTTTGTGCCG
ATTCCTGGTA TTGACGCTGC TGTACTTGCC GAATTGTTCG AACAGCAAAA AGGTACCATC
GTAGAAATGT TTAACATGTT CTCCGGTGGT GCTCTTGAGC GTGCATCTAT TTTAGCACTG
GGCATCATGC CGTATATTTC GGCGTCAATT GTTGTCCAGT TGCTAACAGT AGTTCATCCA
GCGTTAGCGG AACTCAAGAA AGAGGGTGAA GCAGGCCGTC GTAAGATAAG CCAATATACG
CGCTACGGCA CGCTTGTACT TGCAACATTC CAAGCGATTG GTATTGCAAC AGGCTTACCA
AACATGGTCA ACAATCTGGT CGTTATCGAC CAAACCATGT TTACCCTGAT TGCGACCGTG
AGTTTAGTAA CCGGTACCAT GTTCTTAATG TGGTTAGGTG AACAAATTAC AGAGCGTGGA
ATTGGAAACG GTATTTCGAT ACTGATTTTC GCAGGTATTG TTGCTGGATT GCCTAAAGCA
ATCGGTCAAA CAATCGAGCA AGCGCGTCAA GGTGAACTGC ATGTACTTCT TCTGCTGTTA
ATCGCAGTGT TAGCTTTTGC TGTGATTTAC TTCGTTGTTT TCATGGAGCG TGGTCAACGT
CGTATCGTTG TGAACTACGC AAAGCGTCAA CAAGGTCGTA AGGTGTTCGC AGCACAAAGC
ACTCACTTGC CGTTGAAAAT CAACATGGCT GGTGTAATTC CTGCGATTTT TGCGTCAAGC
ATTATCCTGT TCCCAGGAAC ATTGGCGCAG TGGTTTGGTC AGAACGGCGA AAGCAGCACA
TTCGGTTGGC TAACTGATGT GTCTTTAGCT TTGAGCCCAG GCCAGCCTCT GTATGTAATG
CTTTATGCAG CGGCGATTAT CTTCTTCTGT TTCTTCTATA CCGCGTTGGT GTTTAACCCG
CGTGAAACGG CAGATAACTT GAAGAAGTCT GGTGCATTCG TACCCGGTAT CCGCCCAGGT
GAGCAGACAG CGAAATACAT CGATAAAGTA ATGACACGTT TAACCCTTGC AGGTGCACTG
TATATTACTT TTATCTGTCT GATCCCTGAG TTCATGATGG TCGCTTGGAA CGTACGTTTC
TACTTTGGCG GCACATCACT ACTGATTGTA GTTGTCGTGA TCATGGACTT TATGGCACAG
GTACAGACCC ATTTGATGTC TCATCAATAT GAGTCTGTGT TGAAAAAAGC AAATCTGAAA
GGCTACGGCC GTTAA
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| Protein sequence | MARKPGQDFR SAQSGLSKLK SRLFFVIGAL LVFRAGSFVP IPGIDAAVLA ELFEQQKGTI
VEMFNMFSGG ALERASILAL GIMPYISASI VVQLLTVVHP ALAELKKEGE AGRRKISQYT
RYGTLVLATF QAIGIATGLP NMVNNLVVID QTMFTLIATV SLVTGTMFLM WLGEQITERG
IGNGISILIF AGIVAGLPKA IGQTIEQARQ GELHVLLLLL IAVLAFAVIY FVVFMERGQR
RIVVNYAKRQ QGRKVFAAQS THLPLKINMA GVIPAIFASS IILFPGTLAQ WFGQNGESST
FGWLTDVSLA LSPGQPLYVM LYAAAIIFFC FFYTALVFNP RETADNLKKS GAFVPGIRPG
EQTAKYIDKV MTRLTLAGAL YITFICLIPE FMMVAWNVRF YFGGTSLLIV VVVIMDFMAQ
VQTHLMSHQY ESVLKKANLK GYGR
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