| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2118 |
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| Symbol | thiP |
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| ID | 5136028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2272912 |
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| End bp | 2274504 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533574 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_001218034 |
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| Protein GI | 147675055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCGAA CTCCTCAATT AGGCTTTTGG GTCGCGGCTG GTGTCGCGAC CTTTGTCCTC
GCGGCATTAG CGGCGCTGCT CTGGCAAGCG CCACCGCTCA ATCTGAATCT GATCTGGCAA
GATGCCTATT ATCGGCATGT TACCCAGTTC AGCTTTTATC AAGCCTTCTG GTCCACCGTG
CTCAGTGTGG GGTTGGCAAT TCCGGTTGCT CATGCCCTCA GTCAGCGCCG TTTCCCCGGT
CGTGATTTAC TACTGAAACT GTTCGCGATG ACGCTGGTTT TGCCCGTACT GGTGGCGATT
TTTGGTTTAA TCGCGATTTA CGGTAATAGT GGTTTTTTGG CCAAAACGCT GCACAGTGTC
GGGCTCTCGC TGCCGTTTTC GATTTATGGT TTAAACGGTA TTTTACTTGC CCATGTACTG
TTTAATTTGC CTTATGCCAG CCGTTTGCTG CTGCAAAGTT TAGAAGCGAT CCCCAGTGAG
CAGCACAAGC TGTGCGCCCA TCTCGGCATG AGCCGTTGGC AAAAGTTTAA GTGGGTCGAG
TGGCCACGCT TGCGTCAGCA ACTGCCGCAC GTTGCAGGCT TGGTGTTTAT GCTTTGCTTT
ACTAGCTTTG CAACCGTGAT GGCGCTCGGC GGCGGGCCTA AAGCAACCAC CATTGAGCTC
GCGATCTACC AAGCGATCAA ATTCGATTTC GATCTGCAAA TTGGCGCGTT ATTGGCGATT
TGGCAGATGT TGCTATGTAC CTTACTGACT TTTACCCTGC AGCGTTTTTC GCATTCACGC
CCCATGAACA GTTCCGGGAG TAAGGTGACT GAGCGTTGGG TACGTGATTC ATGGCGCGCC
AAAGTTTGGG ATACGAGCTG GATTGTCGCC GCATGTGTCT TGGTATTGCC ACCATTAGTG
ATGGTGGTGC TGGCAGGGCT CAATTCAAAG CTTGGCAAGG TACTGACGAG CGGCGATTTT
TGGTCGGCAG TCAGCCACTC TTTGCAAGTG GCGAGCTTAG CCAGTAGCTT GGCTCTGGCC
AGTGGAATCG CGATGTTACT CACCAGCCGA GCCTTGCGGT TGAAAGCGGC TCATCGCCGC
GCCAATGGCG TGGAGTGGAT CGCGACGTTA ATTCTGGTCA CGCCGGGATT AGTGGTGAGT
ACCGGACTCT TTTTGTTGCT GCGTAATATC ACCGATGTGT TTAGTTTAGC TTACTGGATT
GTGGTCGCAG TCAACGCGCT AATGGCGCTG CCTTACGTCG TAAAAACCTT GAGCCAACCT
ATGTGGCACT TGGCTCAGCA ATATGAATTG CTGTGCGCCA GTTTAGGCAT GTCTGGTTGG
CGTCGATTTC GTTTAGTGGA GTGGCGCGCG CTGCGTAAGC CTCTCTCCCA TGCGTTTGCG
ATCGGTTTTC TGCTCTCGAT GGGGGATTTA AGCGCAATTG CCCTGTTTGG TAGCCAAGAT
TTTCGCACAC TGCCGCTCTA TCTTTATCAA CTGCTCGGCA GCTATCAGAT GGATACCGCG
GCGGTCGTTG CGTTGGCCAT GCTGATCATG AGTGTGGGTT GGTTTTATGT GATTGAGCGG
CTGTTTGCCC AGCGTCCGCT TACCAAACGC TAA
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| Protein sequence | MNRTPQLGFW VAAGVATFVL AALAALLWQA PPLNLNLIWQ DAYYRHVTQF SFYQAFWSTV
LSVGLAIPVA HALSQRRFPG RDLLLKLFAM TLVLPVLVAI FGLIAIYGNS GFLAKTLHSV
GLSLPFSIYG LNGILLAHVL FNLPYASRLL LQSLEAIPSE QHKLCAHLGM SRWQKFKWVE
WPRLRQQLPH VAGLVFMLCF TSFATVMALG GGPKATTIEL AIYQAIKFDF DLQIGALLAI
WQMLLCTLLT FTLQRFSHSR PMNSSGSKVT ERWVRDSWRA KVWDTSWIVA ACVLVLPPLV
MVVLAGLNSK LGKVLTSGDF WSAVSHSLQV ASLASSLALA SGIAMLLTSR ALRLKAAHRR
ANGVEWIATL ILVTPGLVVS TGLFLLLRNI TDVFSLAYWI VVAVNALMAL PYVVKTLSQP
MWHLAQQYEL LCASLGMSGW RRFRLVEWRA LRKPLSHAFA IGFLLSMGDL SAIALFGSQD
FRTLPLYLYQ LLGSYQMDTA AVVALAMLIM SVGWFYVIER LFAQRPLTKR
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