Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2111 |
Symbol | ptsN |
ID | 5135931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2266856 |
End bp | 2267302 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533567 |
Product | PTS system, nitrogen regulatory IIA component |
Protein accession | YP_001218027 |
Protein GI | 147674862 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGA GCGAAGTACT TTCATTGGAC TGCACCAAAA GTGCAGTCCA ATGTTCTAGT AAGAAACGAG CACTAGAAAT CATCAGCGAA ATCGCTGCCC TTCATACTGG CCAGAATGCC ACCGAATTGT TCGAGTGCAT GTTAAGCCGC GAAAAAATGG GCAGTACCGG TATTGGTAAC GGGATAGCCA TCCCACACGC ACGCATGTCC GACAGCGAAA ACGCCGTCGC CGTGCTATTG CAGTGTGAAG AGCCGATTGA ATTTGATTCG ATTGATAATC GTCCGGTGGA TCTCTTGTTT GCCCTGCTGG TTCCAGAAGA TCAGTGCAAA GAGCATTTAA AAACCCTCGC TTGCATGGCA GAACGCCTCA ACGATAAACA GATCCTCAAA CAGCTTCGTA ACGCAGCCAG CGATCAAGAG CTGTACAACA TCATGGTTAA CCAATAG
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Protein sequence | MQLSEVLSLD CTKSAVQCSS KKRALEIISE IAALHTGQNA TELFECMLSR EKMGSTGIGN GIAIPHARMS DSENAVAVLL QCEEPIEFDS IDNRPVDLLF ALLVPEDQCK EHLKTLACMA ERLNDKQILK QLRNAASDQE LYNIMVNQ
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