Gene VC0395_A2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2111 
SymbolptsN 
ID5135931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2266856 
End bp2267302 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID640533567 
ProductPTS system, nitrogen regulatory IIA component 
Protein accessionYP_001218027 
Protein GI147674862 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTGA GCGAAGTACT TTCATTGGAC TGCACCAAAA GTGCAGTCCA ATGTTCTAGT 
AAGAAACGAG CACTAGAAAT CATCAGCGAA ATCGCTGCCC TTCATACTGG CCAGAATGCC
ACCGAATTGT TCGAGTGCAT GTTAAGCCGC GAAAAAATGG GCAGTACCGG TATTGGTAAC
GGGATAGCCA TCCCACACGC ACGCATGTCC GACAGCGAAA ACGCCGTCGC CGTGCTATTG
CAGTGTGAAG AGCCGATTGA ATTTGATTCG ATTGATAATC GTCCGGTGGA TCTCTTGTTT
GCCCTGCTGG TTCCAGAAGA TCAGTGCAAA GAGCATTTAA AAACCCTCGC TTGCATGGCA
GAACGCCTCA ACGATAAACA GATCCTCAAA CAGCTTCGTA ACGCAGCCAG CGATCAAGAG
CTGTACAACA TCATGGTTAA CCAATAG
 
Protein sequence
MQLSEVLSLD CTKSAVQCSS KKRALEIISE IAALHTGQNA TELFECMLSR EKMGSTGIGN 
GIAIPHARMS DSENAVAVLL QCEEPIEFDS IDNRPVDLLF ALLVPEDQCK EHLKTLACMA
ERLNDKQILK QLRNAASDQE LYNIMVNQ