| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2095 |
|---|
| Symbol | plsC |
|---|
| ID | 5135795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2254750 |
|---|
| End bp | 2255535 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640533551 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_001218011 |
|---|
| Protein GI | 147674609 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAA ATCCAAGGGT TTCGGCCTTT TTCTTCCAGT GCCTTCGGAG AAGTTGCATG
ATTGCGTTAT TGCGAATCTT GGCAGTGGCA GTGTTCGCTG TCTATATGTT TGTGTTTGGC
TGCGGTTACT GTTTGTTCAG TCCACGTAAC CCTAAGCATG TTTATACCTT TGGTAAGCAG
TTTGCGGCGA TGTCGAAAGT GTTCGGTATT AAGCTTGAAT ACCGCGCTCC GGCCGATGTC
GATCAGCGTG GTCAGCACAT TTATATTGCT AACCACCAGA ATAACTGGGA TCTGTTTACC
GTTTCTAAAG CGGTAACGCC AAAAGTGGTC ACCGTCGGTA AGAAAAGTCT CGCGTGGATG
CCACTGTTTG GTCAGCTTTA TTGGTTGACG GGCAATATCC TGATTGATCG CGCCAACAAA
GCCAAAGCCA AAGGCACCAT TGATCAAGTG GTTGATTCGA TGAAACAGAG CGATGTTTCG
GTGTGGATGT TTCCGGAAGG TACGCGCTCG CGTGGTCGCG GTTTATTGCC GTTTAAAGCG
GGCGCTTTCC ATGCGGCGAT TGGTGCGGGT GTGCCGATTA TTCCTATCGT GTGTAGCTCG
ACCGATAAGC TTAAATTCAA CCGTTGGAAC AACGGGCATG TGATTGTCGA AGTGTTGCCT
CCCATCAGCA CTGAAGGCTA CAGCAAAGAG AATATCCGCG AGCTGTCACA GCACTGTTAT
GATCTGATGA AAGCCAAACT GGCACAGTTG GATGCCGAAG TGGCTGAGCT GAACCGTAAA
GCCTAG
|
|---|
| Protein sequence | MGRNPRVSAF FFQCLRRSCM IALLRILAVA VFAVYMFVFG CGYCLFSPRN PKHVYTFGKQ
FAAMSKVFGI KLEYRAPADV DQRGQHIYIA NHQNNWDLFT VSKAVTPKVV TVGKKSLAWM
PLFGQLYWLT GNILIDRANK AKAKGTIDQV VDSMKQSDVS VWMFPEGTRS RGRGLLPFKA
GAFHAAIGAG VPIIPIVCSS TDKLKFNRWN NGHVIVEVLP PISTEGYSKE NIRELSQHCY
DLMKAKLAQL DAEVAELNRK A
|
|---|
| |