Gene VC0395_A2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2094 
Symbol 
ID5135987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2254280 
End bp2254669 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content51% 
IMG OID640533550 
Producthypothetical protein 
Protein accessionYP_001218010 
Protein GI147673847 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG TTCTGCATAC TGACGCGGCT CCGGCAGCCA TTGGCCCATA CATTCAAGGT 
GTTGATCTTG GCAACATGGT ACTGACGTCT GGTCAAATCC CAGTGAATCC AGCCACGGGT
GAAATTCCTG CGGATATCGC TGCGCAAGCT CGCCAATCAC TGGATAACGT GAAAGCCGTG
GTTGAAGCCT CTGGCCTAAC CGTCGGTGAC ATTGTAAAAA TGACCGTATT CGTCAAAGAT
CTCAACGACT TCGGCACAGT AAACCAAGTG TACGGCGCAT TCTTTGATGA GCATAAAGTG
GCGCACTACC CAGCGCGTTC TTGTGTTGAA GTGGCACGTC TGCCAAAAGA TGTGGGCATC
GAAATCGAAG CGATCGCAGT ACGCAAGTAA
 
Protein sequence
MTKVLHTDAA PAAIGPYIQG VDLGNMVLTS GQIPVNPATG EIPADIAAQA RQSLDNVKAV 
VEASGLTVGD IVKMTVFVKD LNDFGTVNQV YGAFFDEHKV AHYPARSCVE VARLPKDVGI
EIEAIAVRK