| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2087 |
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| Symbol | rluA-1 |
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| ID | 5137189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2245822 |
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| End bp | 2246559 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533543 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_001218003 |
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| Protein GI | 147673149 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000349962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATGA CTGAGTACAA TCCACCCAAG GAACCGTGGA TTGATGTGAT TTATGAGGAT
GAACACATCA TCGCAGCCAA CAAGCCTTCT GGTTTGTTAT CTGTTCCTGG GCGACCTGTT
GAGCACTACG ACAGTATGTG GGCTCGTTTG GTGGATTACT GCCCTGATGT GAAGGTCGTC
CACCGTTTGG ATATGTCGAC TTCTGGGCTG ATCCTGTTTG CGAAAGGCAA ACATATGGAA
TCGGCGTTGA AGAAGCAGTT CCAGTATCGT CTCACTCATA AAATCTACTA TGCCCGCGTA
TGGGGTGTGA TGGAGCAAGA TGAAGGCGAA GTGAATTTGC CGCTGTGTTG TGATTGGCCA
AACCGCCCGA AACAGAAAGT CTGTTTTGAA GAGGGACGTG ATTCTCTGAC CCGCTATCAA
GTCGTAAAGA GAGAAGAGAA AACCACAGTC GTACGCCTTA TCCCGATCAC AGGACGCTCT
CATCAGCTAC GTGTGCACAT GCAATCGCTC GGCCATCCGA TTGTTGGTGA TGATCTTTAC
GCTCCACAAG AAGCTGTCGA GTTTGCCGAT CGTCTGCAAC TGCACGCTGC GGAGCTCTGT
TTCTACCATC CACGTAGTCA TTGGCTGCGC ACTTTATTTG TCCCTTGTGA CTTCTATCCC
GAAGCCGAGG AGCAGATTTT GCAGCATTTC GATCCTGAGC GAAAATTACC GGACTATAAA
AAGCTATCCC AAGACTAA
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| Protein sequence | MAMTEYNPPK EPWIDVIYED EHIIAANKPS GLLSVPGRPV EHYDSMWARL VDYCPDVKVV
HRLDMSTSGL ILFAKGKHME SALKKQFQYR LTHKIYYARV WGVMEQDEGE VNLPLCCDWP
NRPKQKVCFE EGRDSLTRYQ VVKREEKTTV VRLIPITGRS HQLRVHMQSL GHPIVGDDLY
APQEAVEFAD RLQLHAAELC FYHPRSHWLR TLFVPCDFYP EAEEQILQHF DPERKLPDYK
KLSQD
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