| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2086 |
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| Symbol | |
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| ID | 5135336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2244805 |
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| End bp | 2245782 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533542 |
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| Product | 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | YP_001218002 |
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| Protein GI | 147673560 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000608304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTAC CCACTACTTC TTTGCCTACG GTCGTTTTTC TCGACCGCGC GACCATTCCG
CGCCATATCC CCTTACCTGC TCTGCCTTTT GAACACCATT GGGTTGAGTA TGATGCTTGT
GAGCCTCACC AAGTGGTTGA GCGCCTCTTA GCGGCCGATA TCGTTATCAC TAATAAGGTG
GTACTCACCC GTGAAATGCT GGTTCAGTTG CCTAAGCTCA AGTTGATCGC CATTTCTGCC
ACGGGCACCA ACAACGTCGA TTTGCAGGCG TGTAGTGACC TGAATATCGC GGTGTGTAAT
GTGCAAGGCT ATGCCACGCG CTCCGTACCA GAGCATGTGA TCGCCATGAT GTTTGCTCTA
AGACGTAATC TTATCGGTTA TCACAATGAT ATTGCGGCCG GAGAGTGGCA GCGCCATAAG
CAGTTCTGTT TTTTCACGCA TCCTATCGGC GATATTGCGG GCTCCACCAT GGGCATTATC
GGCAGTGGTG CATTAGGACA AGCGACGGCG AATTTAGCGC GCGCATTAGG TATGCATGTG
CTGTTTGCTG AACGTAAAGG TCAGTTGGAA TGCCGAGTAG GGTACACGTC ATTTGAACAA
GTGCTGGCGC AATCCGATGT GTTATCCCTG CACTGTCCGC TAATGGATGA AACGCGCAAT
ATTATCTCGG AAGCGGAATT GGTGCAGATG AAGCCCAATG CTCTACTGAT CAATACTGGG
CGCGGTGGTT TAGTGGATGA ACAGGCGCTG GTAGATGCGC TGAAAAGACG TCAAATTGCT
GGGGCTGGGG TGGATGTGTT TAGTGTCGAG CCTGCGGATA TGGATAACCC ACTGATTGCC
AACCGTGATC TGCCCAATCT TCTGCTGACA CCGCATGTGG CGTGGGGCAG TGATTCCTCG
ATACAACAAC TCGCGACTAT CTTGATCGAC AACATCAGTG CATTTATGCG TGGTGAAGCG
AAAAATCGAG TCGTCTAG
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| Protein sequence | MSLPTTSLPT VVFLDRATIP RHIPLPALPF EHHWVEYDAC EPHQVVERLL AADIVITNKV
VLTREMLVQL PKLKLIAISA TGTNNVDLQA CSDLNIAVCN VQGYATRSVP EHVIAMMFAL
RRNLIGYHND IAAGEWQRHK QFCFFTHPIG DIAGSTMGII GSGALGQATA NLARALGMHV
LFAERKGQLE CRVGYTSFEQ VLAQSDVLSL HCPLMDETRN IISEAELVQM KPNALLINTG
RGGLVDEQAL VDALKRRQIA GAGVDVFSVE PADMDNPLIA NRDLPNLLLT PHVAWGSDSS
IQQLATILID NISAFMRGEA KNRVV
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