Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2063 |
Symbol | |
ID | 5136228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2221670 |
End bp | 2222206 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533520 |
Product | hypothetical protein |
Protein accession | YP_001217987 |
Protein GI | 147674707 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATGAGAG CTATGGAACC GATCGCTAAA CTCGATTTAG CTTTTTCATT ACTCTGCTTA CAGCATAAGT ACAATACGCG AGTCGCGAGG CTCAGTAAGT CAATTTCTCA TACAGGAGAT GGGCATCTTT ACGCGCTGAT GGGCATTTTA GCTTGGTGGT TAGATGAGAC TCATGGGCTG CTGTTTCTCG CGGTTGGCCT GCTTGCGTTT GCTATTGAAT TACCGATTTA TTGGTTGCTG AAAAACAGTT TTCAGCGCCG ACGTCCACAA GAACTTTCTG CCTTAGTCAC GGCTTATATC ACGCCGAGCG ATCGCTACAG CTTACCGTCG GGACATACCG CTGCCGCCTT CGTCATGGCG ACATTAATTG GTTATATCTA TCCTCATTGG TATGCCGTCG CACTTTGTTG GGCAGGTTTA ATTGGCTTGG CGCGAGTGTT ATTAGGCGTG CATTTTCTAA GTGATGTGAT CGCTGGAGCT TTGCTTGGCA TGGGCAGCGC AACCTATGCA ATGAGCGTAA TGGAGAAAAG CATTTGA
|
Protein sequence | MMRAMEPIAK LDLAFSLLCL QHKYNTRVAR LSKSISHTGD GHLYALMGIL AWWLDETHGL LFLAVGLLAF AIELPIYWLL KNSFQRRRPQ ELSALVTAYI TPSDRYSLPS GHTAAAFVMA TLIGYIYPHW YAVALCWAGL IGLARVLLGV HFLSDVIAGA LLGMGSATYA MSVMEKSI
|
| |