| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1991 |
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| Symbol | pdhR |
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| ID | 5137577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2140843 |
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| End bp | 2141613 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533448 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_001217915 |
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| Protein GI | 147673255 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATC AAAGGATCCG TCAGCCAAAG CTCTCCGATG TGATTGAACA AGAACTGGAG
AGACTGATAG TGGAAGGAAC ACTCTCACCC GGTCAGCAAC TTCCTCCGGA ACGCGAACTG
GCCAAACAGT TTGAAGTGTC TCGCCCCTCG ATCAGAGAAG CCATACAACG CTTGGAAGCC
AAACGCTTGC TTACCCGCCG TCAAGGTGGC GGTACATTCG TTAGTGACCG AATTTGGCAG
AGCTTTTCTG ATCCTCTGCT AAATTTATTG TCTAGCCACT CCGAAACTCA ACTGGATCTG
CTGGAAGCGC GTCATGCGCT GGAAGGTATT TGCGCCTATT TTGCGGCGTT GCGTGGTACC
GAAGAAGATT TTGCTCGTAT TCAGCACTGT GTCACGCGTA TCGCGGAGGC TCAGGCATTG
AATAATGTGG ATGAAGAAGC AGAGCGGGTG ATGGCCTTTT TGATTGCCAT TACTGAAGCG
GCGCACAACG TTGTGCTTCT GCACATCGTA CGCAGCTTGA GTCCACTGCT TGAGCAGAAT
ATTCGTCAGA ATTTTAAACT CTTACATCGC CGCCCTGAAG CGGTAGAGAA AGTAAGCAAA
CACCGGGCTA ACATTGTGGA TGCGATTGTT TCGGGTCAGC CGGAAAAGGC ACGTGAAATG
TCCCATTCTC ACTTAGCTTA TATCGAAGAA ACGTTGTTGG ATTTGACTCG TGAACAGACT
CGCCGTGAGC GATCTCTGCG TCGAATTCAA CAAGGTAATG AGCCGCAATA G
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| Protein sequence | MAYQRIRQPK LSDVIEQELE RLIVEGTLSP GQQLPPEREL AKQFEVSRPS IREAIQRLEA
KRLLTRRQGG GTFVSDRIWQ SFSDPLLNLL SSHSETQLDL LEARHALEGI CAYFAALRGT
EEDFARIQHC VTRIAEAQAL NNVDEEAERV MAFLIAITEA AHNVVLLHIV RSLSPLLEQN
IRQNFKLLHR RPEAVEKVSK HRANIVDAIV SGQPEKAREM SHSHLAYIEE TLLDLTREQT
RRERSLRRIQ QGNEPQ
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