| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1983 |
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| Symbol | murF |
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| ID | 5137782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2127886 |
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| End bp | 2129247 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533440 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001217907 |
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| Protein GI | 147673448 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGCG TAATGCTTTC TCAGCTCAGC TCAGTATTGA ATGCTCGTTT AATTGGTGAG
GATCGCGCGG TCAGTGCCGT ATCGACGGAC AGTCGTGCTA TTCCCGCCGA AGCGCTGTTT
GTTGCCTTGG TCGGTGAACG TTTTGATGCG CACGATTTTG CCTCTCAAGC GGTAACTGGT
GGCGCAGTGG CGCTGTTGGT TGAGCGTGAG CTCGATGCAG AGTGTTCACA ACTGGTTGTT
GCCGATACCA AACAGGCCTT AGGTCAGCTT GGCTCTTGGG TGCATGCGCA GTGTCAAACG
CCTACGGTCG CGATCACCGG AAGTTGTGGC AAAACCACGG TCAAAGAGAT GGTGGCCAGC
ATTTTAAGCC AGAAAGGCCA AGTGCTTTAC ACGCAAGGAA ACTTCAATAA CGACATCGGC
GTTCCGCTGA CTCTGCTGCG CTCAACGACC GAAGATGATT ATGCCGTGAT TGAATTAGGG
GCGAATCATG TAGGTGAAAT TGCCTACACC ACCGCCTTGG TTAAGCCGGA TGTTGCCCTA
GTCAACAACG TAGCGGCAGC GCACTTAGAA GGTTTTGGCT CGATGGATGG CGTTAAACGC
GCTAAAGGTG AAATCTATCA AGGGTTACAG GCGGGTGCCG TGGCGATTGT TAATTTAGAC
AGCAACGGTG GTGACTACTG GAAAGCGGTA CTGGCGGACA AAACCGTGAA AACATTTTCC
GCTACCGATC ACAATGCTGA CTTTTATCCA CGTGATGTGC GGTTAAATGC GCTCGGTATA
GCTAGCTTTA CTTTGGTTAC CCCGGTTGGT GAAGTGGCTG TTGAGTTGGG CATCATGGGC
CAACACAACG TGGCCAATGC ACTGGCTGCT GCGGCCTTAT CACTGGAAAT GGGCGCGAGC
TTGGCGGAAA TTGGTCAAGG TTTAGCGCAT TTATCCAAAG TGAAAGGTCG AGTGGATATG
GCACCGTTGC GTGACGATAT CACGCTTATT GATGACAGCT ATAACGCTAG CGTGCCAGCC
ATGAAAGCGG CGGTGGAGCT GTTAGGCAGC TTTTCCGCTG TACGCTGGTT AATTTTGGGC
AATATGGCGG AGTTGGGTGA TGAAAGTCTT GCACTTCATC AGCAAGTCGG TGAACATGCT
GCACCATTCG GTTTTGAGTT TGTCCTGACG TATGGCAAGG ACGCAAAAGT GATCAGCGAC
CTTTGCCAAG GGCATCACTT TGCTACCCAT CAGGACATGA TGACATTTAT TGAGCAGCAC
ATAGAACAAC AACAGGGTCG TACTCAAGTA TTGTTGGTGA AAGGTGCCAA CAGTGCAGGG
ATGAGTAAAA TTGCCGCTGC TCTCAAGGAG AAATTTGCAT GA
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| Protein sequence | MIRVMLSQLS SVLNARLIGE DRAVSAVSTD SRAIPAEALF VALVGERFDA HDFASQAVTG
GAVALLVERE LDAECSQLVV ADTKQALGQL GSWVHAQCQT PTVAITGSCG KTTVKEMVAS
ILSQKGQVLY TQGNFNNDIG VPLTLLRSTT EDDYAVIELG ANHVGEIAYT TALVKPDVAL
VNNVAAAHLE GFGSMDGVKR AKGEIYQGLQ AGAVAIVNLD SNGGDYWKAV LADKTVKTFS
ATDHNADFYP RDVRLNALGI ASFTLVTPVG EVAVELGIMG QHNVANALAA AALSLEMGAS
LAEIGQGLAH LSKVKGRVDM APLRDDITLI DDSYNASVPA MKAAVELLGS FSAVRWLILG
NMAELGDESL ALHQQVGEHA APFGFEFVLT YGKDAKVISD LCQGHHFATH QDMMTFIEQH
IEQQQGRTQV LLVKGANSAG MSKIAAALKE KFA
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