| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1978 |
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| Symbol | murC |
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| ID | 5135067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2121726 |
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| End bp | 2123186 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533435 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001217902 |
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| Protein GI | 147675354 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0586657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTA AACATACCCA AGACCTCGCC CAAATTCGCG CTATGGTGCC AGAGATGCGC
CGTGTAAAAG CGATCCACTT TATTGGCATT GGCGGGGCGG GGATGAGCGG GATTGCGGAA
GTGCTGCTCA ATGAAGGCTA TCAAATTTCA GGCTCCGATC TGGCCGCGAA TGCGGTCACT
GACCGTTTAG CTGACAAAGG CGCGACCATT TTTATTGGTC ATGAAGCGCA CAATGTTGCT
CACGCAAGCG TGGTCGTGGT CTCGACGGCT ATTAATGAAC AAAACCCTGA AATCCAAGCG
GCGCGTGAAA AACGCATCCC GATTGTTCGT CGTGCTGAAA TGTTGGCAGA GCTGATGCGT
TTTCGCCACG GTATTGCGGT CGCGGGAACT CACGGTAAAA CCACCACGAC GGCACTCGTC
ACTCAGATTT ATTCTGAAGC CGGATTGGAT CCGACCTTTG TGAATGGTGG TTTGGTGAAA
AGCGCTGGCA CCAACGCACG TTTGGGCTCT AGCCGCATTT TGATCGCTGA AGCGGATGAA
AGTGATGCTT CATTCTTGCA TCTGCAACCT ATGGTCACCA TTGTCACCAA TATCGAAGCG
GATCATATGG ATACTTACGG CGGCGATTTT GAAAACCTTA AACAGACCTT TATCGACTTT
TTGCACAATC TGCCTTTTTA CGGCCAAGCG ATTTTGTGTA TTGATGATCC AGTGATTCGT
GAGCTTATTC CGCGTGTCAG CCGCCAAGTG ATCACTTATG GATTCTCAGA AGATGCCGAC
GTGCGCATTG AAAATTACCG CCAGAATGGT CAGCAGGGCC AATTTACCGT GGTACGTAAA
GGCAAAGCGA ATTTGGATAT CACGCTCAAT ATCCCCGGCC GTCACAATGC GCTGAATGCC
GCTGCGGCTA TTGCTGTGGC TACCGAGGAC GATATTCGCG ATGAAGCGAT TTTACGCGCA
ATGGCCAATA CGCAAGGCAC AGGTCGCCGT TTTGACCATC TTGGAGAGTT TGAAACCGGG
AATGGCGTCG CTATGCTGGT GGATGATTAC GGTCACCACC CCACTGAAGT TGACGTGACG
ATTAAAGCGG CGCGTAATGG CTGGGCAGAA AAACGCTTAG TGATGATTTT CCAGCCGCAT
CGTTACACGC GAACTCGCGA TTTGTATGAT GATTTTGCCA ACGTACTTGA GCAAGTTGAT
GTACTGCTCA TGCTCGATGT CTATGCTGCT GGTGAAAAGC CTATCGCAGG TGCTGATGGG
CGATCTTTGT GTCGAACTAT CCGCAGCCGA GGCAAAATCG ATCCGATTTT TGTTCCGGAT
AGCCAAACCT TACCTTCGGT GCTTGCCAAT ATCTTGCAGG ATGGTGACTT GGTACTGACG
CAAGGCGCGG GCGATGTCGG GAAAGTAGCA AGGCATTTAG CCGCGCTTGA ACTCAATATC
GGGCGTATGC AACAGATTTA A
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| Protein sequence | MTIKHTQDLA QIRAMVPEMR RVKAIHFIGI GGAGMSGIAE VLLNEGYQIS GSDLAANAVT
DRLADKGATI FIGHEAHNVA HASVVVVSTA INEQNPEIQA AREKRIPIVR RAEMLAELMR
FRHGIAVAGT HGKTTTTALV TQIYSEAGLD PTFVNGGLVK SAGTNARLGS SRILIAEADE
SDASFLHLQP MVTIVTNIEA DHMDTYGGDF ENLKQTFIDF LHNLPFYGQA ILCIDDPVIR
ELIPRVSRQV ITYGFSEDAD VRIENYRQNG QQGQFTVVRK GKANLDITLN IPGRHNALNA
AAAIAVATED DIRDEAILRA MANTQGTGRR FDHLGEFETG NGVAMLVDDY GHHPTEVDVT
IKAARNGWAE KRLVMIFQPH RYTRTRDLYD DFANVLEQVD VLLMLDVYAA GEKPIAGADG
RSLCRTIRSR GKIDPIFVPD SQTLPSVLAN ILQDGDLVLT QGAGDVGKVA RHLAALELNI
GRMQQI
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