| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1970 |
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| Symbol | dapB |
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| ID | 5135217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2112150 |
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| End bp | 2112959 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533427 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_001217894 |
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| Protein GI | 147674435 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.150485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGAA TTGCGATTGC GGGTGCCGCA GGACGTATGG GACGCAATCT GGTAAAAGCA
ACACACCAGA ATCCGCTTTC CGAATTGGGC GCGGGCTCTG AGCGTCCAGA ATCCTCATTA
GTGGGCGTTG ATATTGGTGA GCTGTGCGGT ATTGGTAAAC AAGGTATTGT TTTAGTTGAT
AACCTAGAGC AAGCCGTTGA GCAGTTTGAT GTGATTATTG ATTTCACTGC GCCTGCCAGC
ACCTTAGCTA ACTTAGCTTT GTGTGAGCAG CATGGTAAAA AACTGGTGAT TGGCACAACG
GGCTTTACCG ATGCTCAGCG CCAAACCATT GAACAAGCAG CAAAGAAGAT CCCGATTGTC
ATGGCGCCCA ACTACAGCGT TGGTGTCAAC TTGGTGTTTA AACTGCTGGA AAAAGCCGCC
AAAGTGATGG GTGACTACTG TGATATCGAA ATCATTGAAG CTCATCATCG CCATAAAGTC
GATGCGCCTT CGGGTACCGC GATTGGCATG GGCGAAGCGA TTGCCCATGC GATGGGTAAT
CAACTGAGTG ATGTGGCGGT GTACGCGCGA GAAGGGATCA CCGGTGAGCG TTCACGCAAT
GAAATTGGGT TTGCCACGAT TCGTGCGGGA GACATCATTG GTGAGCATAC CGCCATGTTT
GCCGATATTG GTGAGCGAGT GGAGATCACC CACAAAGCCA CTGACCGAAT GACGTTTGCC
AATGGTGCAG TCAAAGCCGC CATTTGGCTC GCGGAGCAAC CCGCCGGTTT CTACACCATG
ACCGATGTGC TCGGATTGAA TGATCTCTAA
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| Protein sequence | MVRIAIAGAA GRMGRNLVKA THQNPLSELG AGSERPESSL VGVDIGELCG IGKQGIVLVD
NLEQAVEQFD VIIDFTAPAS TLANLALCEQ HGKKLVIGTT GFTDAQRQTI EQAAKKIPIV
MAPNYSVGVN LVFKLLEKAA KVMGDYCDIE IIEAHHRHKV DAPSGTAIGM GEAIAHAMGN
QLSDVAVYAR EGITGERSRN EIGFATIRAG DIIGEHTAMF ADIGERVEIT HKATDRMTFA
NGAVKAAIWL AEQPAGFYTM TDVLGLNDL
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