Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1964 |
Symbol | |
ID | 5136160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2104856 |
End bp | 2105467 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640533421 |
Product | hypothetical protein |
Protein accession | YP_001217888 |
Protein GI | 147674421 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGTTA TAAAAAATGG AAGTGAGATT AGTATTTTTA ATCTATCTCA GGGTGAGAAA ACACTTATCG CTTTGGTTTC TGATATCGCT CGAAGATTAG TAATACTAAA TCCTAGCTTA GAAAATCCGT TAAATGGATA TGGTATTGTT TTAATCGATG AAATTGATCT TCATTTACAT CCTAAATGGC AACAAACTAT TGTTCAAAAA CTAGAAAATA CCTTCCCAAA TATCCAATTC ATCCTATCAA CGCATAGCCC ACTAGTTCTA ACAACAGTTA CTTCGGAACA AATAAAAATA ATTAATGAAT TAGACTATAG ATTCAAATTA CTATCTCCAA CAAGCAATCC ATTTGGCAAA AATGCCTCGG ATGCACTAGC TATCATGGAA ACATCCGAAT CTCCATTAGT TCATAGTGAA GAAATTTTAG CTCTTATAAA AAAATATGAA TCTCTGGTGA AAAGAGGACA AGAAGATTGT CGAAAGACCA AAGAGATTAA AAAACGCATA GAAAGCACTG GATATACATT TGATATAGCA GACATTGAAA TGTGGCGTTT TATAGCAGAA AATCGTGAAT TTTTTATCGA TAAATCTGAA AGTGATGACT AA
|
Protein sequence | MTVIKNGSEI SIFNLSQGEK TLIALVSDIA RRLVILNPSL ENPLNGYGIV LIDEIDLHLH PKWQQTIVQK LENTFPNIQF ILSTHSPLVL TTVTSEQIKI INELDYRFKL LSPTSNPFGK NASDALAIME TSESPLVHSE EILALIKKYE SLVKRGQEDC RKTKEIKKRI ESTGYTFDIA DIEMWRFIAE NREFFIDKSE SDD
|
| |