| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1943 |
|---|
| Symbol | thrA |
|---|
| ID | 5135687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2073083 |
|---|
| End bp | 2075542 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640533400 |
|---|
| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
|---|
| Protein accession | YP_001217867 |
|---|
| Protein GI | 229259765 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0938577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTAT TAAAGTTTGG AGGTTCATCG CTGGCGGATC CGGAGCGTTT TCTACGCGCT
GCCGATATCA TCGCGAATAA CGCACAGCAG GAAGAGGTGG CCGTTGTCCT CTCTGCTCCG
GGAAAAACCA CCAATAAATT GGTGGCAGTG ATTGAAAGTG CTTTACGTCA GGGAGAGGTG
GAAGCGCAAA TCGTAGAGCT AGAGAGCTCA TTCTATGCCT TGCTTGATGG CATTAAAGCG
CAGCTCCCGA ATTTGGATGA CAGTGCTTAT CAACAGCAAG TGCACTCTTC CATGACTCAG
TTACGCCAGT TTGTGCACGG CATTACGTTG CTCGGTATGT GTCCAGACAA TGTGAATGCA
CGCATTATCA GTAAAGGTGA ACGCGTTTCC ATTCAATTGA TGAAAGCGGT GATGGAAGCC
AAAGGTCTGC CAGCGAATTT GGTTGATCCC GTTAAATACC TGCTTGCCAA AGGGGATCAT
CTTGAAGCTA TGGTCGATGT GGAAATTTCG ACTCAGCGTT TCAGACAAGC ACCATTGCCA
CAACAGCACG TCAATATCAT GCCGGGCTTT ACTGCGGGTA ATGCACAGGG TGAGTTGGTC
TGTTTAGGGC GTAACGGTTC GGATTACTCA GCCGCGGTAC TGGCTGCCTG TTTACGTGCG
GATTGTTGTG AAATCTGGAC GGATGTGGAT GGAGTTTATA ACTGCGATCC GCGTTTGGTC
GATGATGCGC GCCTTCTTAA ATCCCTTAGC TATCAAGAGG CGATGGAGCT TTCTTACTTC
GGAGCATCTG TGTTGCATCC GAAGACCATT GCACCGATTG CTCAATTTCA AATCCCTTGT
TTGATCAAAA ACAGCTTCAA TCCACAAGGT GCGGGCACCT TGATTGGCCA AGACACTGGC
GAAGATAAAC TCGCGATCAA AGGCATTACC ACTCTGAGCA ATCTCACTAT GGTCAACGTT
TCTGGTCCAG GAATGAAAGG CATGGTGGGG ATGGCGAGCC GCGTGTTTGG CGCGATGTCA
GCGGCCGATG TGTCGATCGT GCTTATCACT CAATCTTCTT CGGAATACAG CATCAGTTTC
TGTATCGAAG CACAACATAA AGCTTTGGCA CAGCAAGCGC TGGCGGATGC ATTTGAACTG
GAACTCAAAG ATGGCCTGCT TGAGCCGGTT GAGTTTGTCG ATAACGTCGC CATCATCACG
CTGGTTGGTG ATGGTATGCG CACCTCTCGC GGTGTCGCGT CGCAATTTTT CTCATCTCTG
GCCGAAGTAC ACGTCAACGT GATTGCAATT GCCCAAGGCT CTTCTGAGCG TGCGATTTCA
GCGGTGATCC CCGATGATAA GATTTCAGAA GCGATCAAGG CTTGCCACGA AAACCTCTTC
AACTCTAAAC ACTTTTTAGA TGTGTTTGTG GTCGGTGTTG GTGGCGTGGG TGGTGAGTTG
GTGGATCAAA TTCAGCGTCA ACAAGCCAAG CTTGCGGAAA AAGGCATCAT GATGCGCGTT
TGTGGCCTCG CTAACAGTAA AGGCATGCTG CTTGATAGCC AAGGCTTGCC GTTGGAGCAG
TGGCGCGATC GTATGGTCAA TGCGGATCAA GCGTTCAGTT TAGAGAATCT GGTGGCTTTG
GTGCAGCGTA ATCACATCAT TAACCCAGTA TTGGTGGATT GCACGTCCAG TGATGAGATT
GCTAACCAGT ATGCGGATTT CCTCGCCGCA GGTTTCCATG TGGTGACCCC GAACAAGAAA
GCCAATACCG CTAGCATGAG TTATTACCAT CAGCTACGTA ATGTGGCGCG TCACTCGCGT
CGTAAACTGA TGTATGAAAC TACAGTTGGC GCGGGTCTGC CCGTTATCGA AAACTTGCAA
AACCTAATTG CAGCAGGGGA TGAGCTGGAA AAATTCAGCG GTATTCTCTC AGGTTCTCTC
TCCTTTATCT TTGGTAAATT GGATGAAGGC ATGACCTTGA GCCAAGCAAC GCAGCTTGCT
AAAGAGAAAG GCTTTACAGA GCCAGATCCG CGCGATGACC TCTCTGGTAT GGATGTGGCG
CGTAAGTTAC TGATTTTGGC GCGTGAAGCG GGTTACGAGT TGGAGCTGAG CGATGTGGAT
GTTGAACAAG CTCTGCCCGC TGGCTTTGAT GCTTCAGGCA GTGTTGAGGA GTTCATGGCT
CGTTTAGCGC AAGCCGATGC CGCGTTTGCT GAGCGAGTAG CGCAAGCCAA AGCCGAAGGT
AAAGTGCTGC GCTATGTGGC GCAAATCGTC GATGGCCAGT GCCAAGTGCG GATTGTCGCG
GTTGATGAAA ACGATCCTAT GTTCAAAGTC AAAGAAGGTG AAAACGCGCT GGCTTTCTAC
AGCCGTTACT ATCAGCCAAT CCCATTGGTA TTACGTGGTT ACGGCGCGGG TTCTGAAGTG
ACTGCTGCAG GCGTGTTCTC AGATGTGATG CGTACACTCG GTTGGAAATT AGGGGTTTAA
|
|---|
| Protein sequence | MRVLKFGGSS LADPERFLRA ADIIANNAQQ EEVAVVLSAP GKTTNKLVAV IESALRQGEV
EAQIVELESS FYALLDGIKA QLPNLDDSAY QQQVHSSMTQ LRQFVHGITL LGMCPDNVNA
RIISKGERVS IQLMKAVMEA KGLPANLVDP VKYLLAKGDH LEAMVDVEIS TQRFRQAPLP
QQHVNIMPGF TAGNAQGELV CLGRNGSDYS AAVLAACLRA DCCEIWTDVD GVYNCDPRLV
DDARLLKSLS YQEAMELSYF GASVLHPKTI APIAQFQIPC LIKNSFNPQG AGTLIGQDTG
EDKLAIKGIT TLSNLTMVNV SGPGMKGMVG MASRVFGAMS AADVSIVLIT QSSSEYSISF
CIEAQHKALA QQALADAFEL ELKDGLLEPV EFVDNVAIIT LVGDGMRTSR GVASQFFSSL
AEVHVNVIAI AQGSSERAIS AVIPDDKISE AIKACHENLF NSKHFLDVFV VGVGGVGGEL
VDQIQRQQAK LAEKGIMMRV CGLANSKGML LDSQGLPLEQ WRDRMVNADQ AFSLENLVAL
VQRNHIINPV LVDCTSSDEI ANQYADFLAA GFHVVTPNKK ANTASMSYYH QLRNVARHSR
RKLMYETTVG AGLPVIENLQ NLIAAGDELE KFSGILSGSL SFIFGKLDEG MTLSQATQLA
KEKGFTEPDP RDDLSGMDVA RKLLILAREA GYELELSDVD VEQALPAGFD ASGSVEEFMA
RLAQADAAFA ERVAQAKAEG KVLRYVAQIV DGQCQVRIVA VDENDPMFKV KEGENALAFY
SRYYQPIPLV LRGYGAGSEV TAAGVFSDVM RTLGWKLGV
|
|---|
| |