| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1935 |
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| Symbol | |
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| ID | 5135265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2065030 |
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| End bp | 2066460 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533392 |
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| Product | sodium/alanine symporter |
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| Protein accession | YP_001217859 |
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| Protein GI | 147674420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000192586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGACT TAATTAATTT AATGAATGAC CTACTATGGG GTTCCATCTT GGTATACCTA
TTGGTCGGGG TCGGTATCTA CTTCACTTTG CGATTGGGTT TTATCCAATT TCGTCATTTC
ACCCACACTT TTACCGTCCT CAAAAATAGC CGTAAAGCGG ATAACGCTGG CATCTCCTCT
TTCCAAGCGT TATGTACCAG CCTTGCCGCA CGTGTCGGTA CGGGGAACAT GGCCGGGGTG
GCGGTTGCTT TAACCGCTGG TGGTCCTGGC GCCATCTTCT GGATGTGGTT GATTGCCATG
TTAGGCATGG CGACTTCTTT CGCTGAAAGT ACCCTAGCTC AGTTGTATAA AACGCGTGAC
AAAGATGGCA ATTACCGCGG CGGTCCAGCG TATTACATGG AAAAAGGCCT TGGTATGCGT
TGGATGGGGG TGCTGTTCTC CATCTTCCTG ATCATTGCGT TTGGTTTGGT GTTTAACGCG
GTGCAAGCCA ACTCAATCAC CAATGCGATG AAAACGGCTT TCGGTTTTGA ACCCATGCTG
ATCGGTATTG GTATCGTGTT GCTGACCGCT TTCGTGATTT TTGGTGGCAT CCGTAAGATT
GCACGGACGG CAGAGCTGAT TGTGCCTTTC ATGGCGTTTG CTTATCTGGC GATTGCTCTG
TTTGTCGTGG TCATGAATTA TGAGAAAGTG CCTGATGCGA TTAGCCTGAT TTTCAAAAGT
GCCTTCGGTT TACAAGAAGC GGCTGCAGGT GGCCTAGGCT ATGCGATTGC ACAAGCTATG
ATCAACGGTG TGAAACGTGG CTTGTTCTCA AACGAAGCGG GTATGGGTTC TGCACCTAAC
GCCGCGGCTT CTGCAACGCC ATATCCACCA CACCCAGCTT CACAAGGTTA CGTGCAAATG
CTTGGTGTGT TCATCGATAC GATTGTGATC TGTACCGCGA CAGTGGCGAT TATCCTTATG
TCTGGTGAGT ATGTACCGCA CGGCGAGTTA ACGGGTATTG AGCTGACTCA GCGTGCACTC
AGTTCACAAG TAGGGGATTG GGGAGGTATC TTTATCGCAT TTGCGATCTT CTTCTTCGCT
TTTACTTCGA TCATCGCCAA CTACTCGTAT GCGGAAACCA ACCTGATTTT CCTTGAGCAC
AACAATAAGA AAGGCTTAGT GCTGTTTCGT CTCGTGTTCT TAGGTATGGT GATGTTTGGC
TCGTTGGCAA CATTGCCAAC GGTGTGGGCG ATGGCGGATG TCTCGATGGG CTTGATGGCG
ATTGTGAACT TGGTCGCTAT CCTCCTGCTC TCAGGTATCG TGATTAAACT GGCGAAAGAT
TACAACCGTC AGCTGGATGC TGGCAAAGTA CCGACCTTTG ATGCCAATGA TTACCCAGAG
TTGAAATCTC AGCTTGAAGA TGGCATTTGG GATAACAACA AAGCGTCATA G
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| Protein sequence | MTDLINLMND LLWGSILVYL LVGVGIYFTL RLGFIQFRHF THTFTVLKNS RKADNAGISS
FQALCTSLAA RVGTGNMAGV AVALTAGGPG AIFWMWLIAM LGMATSFAES TLAQLYKTRD
KDGNYRGGPA YYMEKGLGMR WMGVLFSIFL IIAFGLVFNA VQANSITNAM KTAFGFEPML
IGIGIVLLTA FVIFGGIRKI ARTAELIVPF MAFAYLAIAL FVVVMNYEKV PDAISLIFKS
AFGLQEAAAG GLGYAIAQAM INGVKRGLFS NEAGMGSAPN AAASATPYPP HPASQGYVQM
LGVFIDTIVI CTATVAIILM SGEYVPHGEL TGIELTQRAL SSQVGDWGGI FIAFAIFFFA
FTSIIANYSY AETNLIFLEH NNKKGLVLFR LVFLGMVMFG SLATLPTVWA MADVSMGLMA
IVNLVAILLL SGIVIKLAKD YNRQLDAGKV PTFDANDYPE LKSQLEDGIW DNNKAS
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