| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1929 |
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| Symbol | deoC |
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| ID | 5137095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2060303 |
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| End bp | 2061082 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533386 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_001217853 |
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| Protein GI | 147674428 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.278223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT TAAAAGTAGC AGCTCTACGT GCACTGAAAC TGATGGATCT CACCACGTTG
AATGACAACG ATACGGATGC CAAAGTGATC CAACTTTGTC ATGATGCGAA AAGTCCAGTC
GGCAACACGG CTGCCATTTG TATTTACCCT CGCTTTATTC CTATTGCTAA GAAGACACTT
CGCGAGCAAG GAACCCCTGA AATCCGTATT GCTACGGTAA CCAATTTTCC TCACGGTAAT
GACGATATTG AAATCGCCGT TGCTGAAACG AAAGCCGCTG TTGCTTACGG TGCTGATGAA
GTGGATGTGG TATTCCCATA TCGCGCTCTG ATCGCAGGCA ACGAGCAAGT CGGTTTTGAT
CTGGTGAAAC AGTGTAAAGC GGCTTGTGGC GACAAAGTGC TACTGAAAGT GATCATCGAA
ACTGGTGAGC TGAAACAAGA AGCGCTGATC AAAAAAGCCT CTCAAATCTG TATTGAAGCT
GGCGCAGATT TCATCAAGAC CTCAACCGGC AAAGTGCCAG TAAATGCGAC ACCAGAATAT
GCACGCATGA TGCTGGAAGT GATCCGTGAT ATGGGCGTAG CCAAAACCGT CGGTTTCAAA
CCTGCCGGTG GTGTTCGTAC CGCAGAAGAT GCGCAGCAAT ATCTGGCCAT GGCCGATGAG
ATCCTCGGTG GCGATTGGGC AGACAGCCGT CACTACCGTT TCGGCGCTTC AAGCCTACTG
ACTAACCTTC TGAATACATT AGAAGTGACA GACCAAAAGG CAGATCCTGC CGCTTACTAA
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| Protein sequence | MSELKVAALR ALKLMDLTTL NDNDTDAKVI QLCHDAKSPV GNTAAICIYP RFIPIAKKTL
REQGTPEIRI ATVTNFPHGN DDIEIAVAET KAAVAYGADE VDVVFPYRAL IAGNEQVGFD
LVKQCKAACG DKVLLKVIIE TGELKQEALI KKASQICIEA GADFIKTSTG KVPVNATPEY
ARMMLEVIRD MGVAKTVGFK PAGGVRTAED AQQYLAMADE ILGGDWADSR HYRFGASSLL
TNLLNTLEVT DQKADPAAY
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