Gene VC0395_A1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1921 
SymbolfusA-2 
ID5136924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2048626 
End bp2050713 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content47% 
IMG OID640533378 
Productelongation factor G 
Protein accessionYP_001217845 
Protein GI147673153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000041036 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATT TATCATTATA CAGAAACATT GGTATCTTCG CGCACGTTGA CGCGGGTAAG 
ACCACTACCA CTGAGCGTAT CCTGAAGCTG ACTGGTAAAA TCCACCGTCT GGGCGAAGTA
CATGACGGCG CTTCAACGAT GGACTTCATG GAACAAGAAG CTGAGCGTGG TATCACTATC
CAGTCTGCTG CGACTACCTG TTTCTGGAAA GGTCACCGTT TTAACGTAAT CGACACCCCG
GGACACGTTG ACTTCACCGT TGAAGTATAC CGTTCTCTGA AAGTTCTTGA CGGTGGTATC
GGTGTATTCT GTGGTTCTGG CGGTGTTGAA CCTCAGTCAG AAACTAACTG GCGTTACGCG
AACGAATCAG AAGTATCTCG TCTGATCTTC GTTAACAAAC TAGACCGTAT GGGTGCTGAC
TTCTTCCGCG TAGTTGAGCA AGTGAAGAAA GTTCTTGGCG CAAACCCACT GGTTATGACT
CTACCTATTG GCCGCGAAGA TGAATTCGTT GGTGTGGTTG ATGTACTAAC TCGTCAAGCG
TACGTATGGG ATGACTCAGG TCTTCCAGAA AACTTCGAAG TGAAAGAAGT TCCAGCAGAC
ATGGTTGATC AGGTAGAAGA ATACCGCGAA ATGATGATCG AAACTGCTGT TGAGCAAGAT
GACGAGCTGA TGATGGCTTA CATGGAAGGC GAAGAGCCAA CTGTTGAGCA AATCAAAGCA
TGTATCCGTA AAGGTACACG TGATCTCGCG TTCTTCCCAA CTTTCTGTGG TTCTGCGTTT
AAAAACAAAG GTATGCAGCT AGTTCTGGAT GCAGTTGTTG ACTACCTGCC TTCTCCAACA
GAAGTTGAGC CACAACCACT GACTGATCCA GCAACGGGTG AGCCTACTGG TGAAGTAGCA
ACAGTATCTG TTGATGCACC ACTAAAAGCG CTAGCGTTCA AGATCATGGA TGACCGTTTT
GGTGCCCTGA CCTTCGTTCG TCTCTACTCA GGTAAGATTA AGAAGGGTGA TACCATTCTT
AACAGCGCAA CAGGTAAAAC TGAGCGTATC GGCCGTATGG TTGAGATGCA CGCAAACGAC
CGTAACGAAG TGGAATCTGC ACAAGCAGGT GACATCATCG CGATCGTTGG TATGAAGAAC
GTTCAAACAG GTCACACTCT ATGTGATCCT AAGCACGAAT GTACTCTTGA GCCAATGATT
TTCCCAACAC CAGTTATCTC TATCGCTGTT AAGCCTAAAG ATAAGAACGG TTCTGAGAAA
ATGGGTATCG CGATTGGTAA GATGGTTGCA GAAGATCCAT CATTCCAAGT GGAGACTGAC
GAAGATTCTG GCGAAACCAT CCTGAAAGGT ATGGGTGAGC TGCATCTAGA CATCAAAGTA
GACATCCTTA AGCGTACTTA CGGCGTTGAG CTGGAAGTGG GTGCTCCTCA AGTTGCTTAC
CGTGAAACTA TCACTAAAGC AGTTGAAGAT AGCTACACGC ATAAGAAACA GTCTGGTGGT
TCAGGTCAGT TCGGTAAGAT CGACTACCGT ATCCGTCCAG GAGAGCAAAA CTCTGGCTTC
ACCTTCAAGT CAACCGTTGT TGGTGGTAAC GTTCCTAAGG AATTCTGGCC AGCAGTTGAG
AAAGGCTTCA AGTCTATGAT GGATACCGGT ACTCTTGCTG GCTTCCCTGT ACTTGACGTT
GAAGTTGAAC TGTTCGACGG TGGCTTCCAC GCAGTTGACT CATCTGCAAT CGCATTTGAA
ATCGCAGCGA AAGGCGCATT CCGTCAGTCA ATTCCAAAAG CGGCTCCTCA GCTTCTTGAG
CCAATCATGA AAGTGGATGT GTTCACTCCG GAAGATCACG TGGGTGACGT TATCGGTGAC
TTGAACCGTC GTCGTGGCAT GATCAAAGAC CAAGAAATGG GTCTTACAGG CGTACGCGTT
AAAGCAGACG TACCACTATC TGAGATGTTC GGCTACATCG GTTCTCTACG TACAATGACT
TCTGGTCGTG GTCAGTTCTC TATGGAGTTC TCTCACTACG CACCATGTCC AAACAACGTA
GCTGAGCAAG TTATTGCTGA AGTTAAAGAG CGTAATGCGA AGAAGTAA
 
Protein sequence
MADLSLYRNI GIFAHVDAGK TTTTERILKL TGKIHRLGEV HDGASTMDFM EQEAERGITI 
QSAATTCFWK GHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NESEVSRLIF VNKLDRMGAD FFRVVEQVKK VLGANPLVMT LPIGREDEFV GVVDVLTRQA
YVWDDSGLPE NFEVKEVPAD MVDQVEEYRE MMIETAVEQD DELMMAYMEG EEPTVEQIKA
CIRKGTRDLA FFPTFCGSAF KNKGMQLVLD AVVDYLPSPT EVEPQPLTDP ATGEPTGEVA
TVSVDAPLKA LAFKIMDDRF GALTFVRLYS GKIKKGDTIL NSATGKTERI GRMVEMHAND
RNEVESAQAG DIIAIVGMKN VQTGHTLCDP KHECTLEPMI FPTPVISIAV KPKDKNGSEK
MGIAIGKMVA EDPSFQVETD EDSGETILKG MGELHLDIKV DILKRTYGVE LEVGAPQVAY
RETITKAVED SYTHKKQSGG SGQFGKIDYR IRPGEQNSGF TFKSTVVGGN VPKEFWPAVE
KGFKSMMDTG TLAGFPVLDV EVELFDGGFH AVDSSAIAFE IAAKGAFRQS IPKAAPQLLE
PIMKVDVFTP EDHVGDVIGD LNRRRGMIKD QEMGLTGVRV KADVPLSEMF GYIGSLRTMT
SGRGQFSMEF SHYAPCPNNV AEQVIAEVKE RNAKK