| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1907 |
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| Symbol | |
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| ID | 5135300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2030614 |
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| End bp | 2031528 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533364 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001217831 |
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| Protein GI | 147674585 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGCC ATATTTCGCT CAAACAATTG CGGGTTTTCA CCACCATCAC TCAACATAAA
AGTTTGACTG TCGCCGCAGA AGTGCTGTGC CTCTCCAAAG CCGCGGTCAG TGTCGCGCTG
TCAGAGCTGG AAAAACAGCT TGGTCACGCA CTGTTTGATC GCGTCAACAA CCGTTTGGTG
CTCAATCAAG AAGGGCAAAA ACTGCTGCCA ATGGCCGATG AACTGCTGCA ACGCGCCAAA
GATATCGACC GTTTGTTTGC AGAGCAGCAG GTGCTTACCG GCAAACTGCG CATCGGTTCG
AGTGACACCA TAGGTAATCA AGTTGCACCT TATCTGATCA GTGCTTTTAG GCAGTTGCAT
CCTCATCCGT CACAAAGCCT GTTTATTTCC AACTCAGCGC AAGTGTGCCA AAAGCTGGTC
GATTACGAGC TCGATATCGG TCTGATTGAA GGCAAAACGC TACATCCCGA GCTCATCTCT
ACTCAGTTTA GCCAAGATGA GATGTGTATC ATCTGTGCGC CCGATCATCC TCTCGCGCAG
CAAGAGCGCT TGGTCATGAG CGATTTTGAA CACAGTGATT GGGTGCTGCG TGAAGCAGGT
TCTGGCTCGC GCGAGTTTTT CTTACGTGTG ATTGCGCCAC GCATCGAGCA CTGGATTGAA
GCGTTTGAAC TCAATACCAC CGAAGCGCTG ATCAATAGTG TCTCTTCCGG TTTAGGGCTA
GGTTGCTTGT CTCGATTAGC CGCGAAAACG CCTCAACAAG ATGGGCGCGT GGTGATTCTC
AATGTCCCGC TCGATATGAA ACGTCGCTTC TGGATGTTGG TTCATAAAGA GAAATACCAA
AACCCACTGC TACGGCAGTT CATTGAATTT TGTCCCCAAT GGGCGAGCCA AAGCGCCCTA
CTGCAACTCG ATTAA
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| Protein sequence | MASHISLKQL RVFTTITQHK SLTVAAEVLC LSKAAVSVAL SELEKQLGHA LFDRVNNRLV
LNQEGQKLLP MADELLQRAK DIDRLFAEQQ VLTGKLRIGS SDTIGNQVAP YLISAFRQLH
PHPSQSLFIS NSAQVCQKLV DYELDIGLIE GKTLHPELIS TQFSQDEMCI ICAPDHPLAQ
QERLVMSDFE HSDWVLREAG SGSREFFLRV IAPRIEHWIE AFELNTTEAL INSVSSGLGL
GCLSRLAAKT PQQDGRVVIL NVPLDMKRRF WMLVHKEKYQ NPLLRQFIEF CPQWASQSAL
LQLD
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