| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1896 |
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| Symbol | |
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| ID | 5137280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2013593 |
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| End bp | 2014807 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533353 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001217820 |
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| Protein GI | 147673408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily
[TIGR03392] cysteine desulfurase, catalytic subunit CsdA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGCTCA ATCTTGATGC AATCCGTGCG CAGTTTCCGG CGCTGCAACA AATCGTCAAC
GGTAACCCGC TGGTCTATCT CGACAGTGCG GCCACTACGC AAAAACCACA ATGTGTGATT
GATGCCATCA GCCACTACTA CAGCCAGCAC AATGCCAATG TACATCGCGG TAGCCACAGC
TTGACGGCGC AAGCCACCAG CCAATTTGAA GGCGCGCGTG AACAAGTCGC ACAATTTATT
GGTGCGCCAA GCAGCAAAAA TATTATCTGG ACGCGCGGTG CTACCGAAGC ACTCAACCTC
ATTGCACAAA GTTATGCCCG CAGCACATTA CAAGCTGGGG ATGAGATTCT GGTCAGTGAA
ACTGAACACC ACGCCAATAT CGTGCCGTGG CAAATGGTCG CTGAGCAAAC GGGCGCGAAA
GTGGTCAAAA TCCCGATGAC AACAACGGGT GAATTTGGCC TTGCTGCCTT TCGGCAATTG
CTGTCACCAC GCTGCAAAAT CGTAGCCCTA GCCCATATCA CCAATGTCAC GGGAACTCGC
CAGCCGATTG AAGCAGTCAT CCAAGCCGCA CATCAACAAG GCGCGATTGT GGTGATCGAT
GGCGCTCAAG GCATAGTCCA TGAAACCGTA GACGTTCGCG CGCTGGATGC GGATTTCTAT
GTATTCTCGG GCCATAAGCT GTATGCGCCA GCAGGGATTG GTGTGTTGTA CGGCAAAACG
GCGCTTTTAG AAGCCATGCC ACCTTGGCAT GGCGGCGGCA AGATGGTTGA AAAGGTCTCG
TTTGATGGTA CAACCTTTAC CGGCTTGCCC GGAAAATTTG AAGCAGGCAC GCCGAATGTG
GCAGGTGCCA TTGCTCTGGC CACCGCGATT GACTGGTATC AAAGTCTTGA TCGAGCCGCC
GTGGAAGCGC ACTTACACCA ACTGCAACAG CAAGCTTACC AAGCTATTTC GCAAATCGAT
GATATTCGCG TGCTCGGTTA TCAGCCTAAC GCCAGTGTAC TGAGCTTAGT GATGGATGGC
GTACATCATC AAGACCTCGC CACCTTACTC GATCAACAAG GAATTGCCGT TCGTGCGGGG
CATCATTGTG CTCATCCTTT GATGGATGCC TTTGGCGTAA AAGGGACGGT GCGAATTTCT
TTCGGAGTGT ACAACAGCGC AGAAGAGGTG GAACGCTTGA TCGCCGCCAT CCATAAAGCG
GTCGATTTAC TGTAA
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| Protein sequence | MMLNLDAIRA QFPALQQIVN GNPLVYLDSA ATTQKPQCVI DAISHYYSQH NANVHRGSHS
LTAQATSQFE GAREQVAQFI GAPSSKNIIW TRGATEALNL IAQSYARSTL QAGDEILVSE
TEHHANIVPW QMVAEQTGAK VVKIPMTTTG EFGLAAFRQL LSPRCKIVAL AHITNVTGTR
QPIEAVIQAA HQQGAIVVID GAQGIVHETV DVRALDADFY VFSGHKLYAP AGIGVLYGKT
ALLEAMPPWH GGGKMVEKVS FDGTTFTGLP GKFEAGTPNV AGAIALATAI DWYQSLDRAA
VEAHLHQLQQ QAYQAISQID DIRVLGYQPN ASVLSLVMDG VHHQDLATLL DQQGIAVRAG
HHCAHPLMDA FGVKGTVRIS FGVYNSAEEV ERLIAAIHKA VDLL
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