| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1878 |
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| Symbol | apbE |
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| ID | 5135954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1997115 |
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| End bp | 1998218 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533335 |
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| Product | thiamin biosynthesis lipoprotein ApbE |
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| Protein accession | YP_001217802 |
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| Protein GI | 147673710 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTTTTA CAAATTGGAT ATTGAAAGTG TCGATGGTTA TCTGGTTTAG GGTATCGGTA
TTTCCCATAT CAATTTTTAA CTATGAAAGG AGTAAACAAG TGAGAAATTG GCTTGTTGCA
TTAGCTTCTC TTCTCTTGCT GGCTGGCTGT GAAAAGCCCG CAGAGCAGGT ACATCTCAGT
GGCCCAACCA TGGGAACCAC TTACAACATC AAATACATTC AACAGCCGGG AATTGCGGAT
TCGAAAACAC TGCAAACCGA GATTGATCGA CTCCTTGAAG AAGTGAACGA TCAAATGTCG
ACTTACCGTA AAGACTCTGA GCTCAGCCGT TTTAACCAGC ATACCAGTAG CGAACCTTTT
GCCGTTTCTA CACAAACGTT AACCGTGGTG AAAGAGGCGA TTCGTTTGAA CGGTCTTACT
GAAGGTGCTT TAGATGTGAC CGTCGGACCT TTGGTTAATC TGTGGGGATT TGGCCCTGAA
GCCCGTCCTG ATGTGGTACC AACCGATGAA GAGCTGAATG CGCGTCGTGC TATTACTGGC
ATTGAGCATC TGACGATTGA AGGGAATACG CTGAGTAAAG ATATTCCTGA ACTGTATGTC
GACTTGTCTA CGATTGCCAA AGGTTGGGGA GTAGATGTGG TCGCCGATTA CCTTCAATCT
CAAGGTATCG AAAACTACAT GGTAGAAATT GGCGGAGAAA TCCGTTTGAA AGGACTGAAC
CGTGATGGTG TTCCCTGGCG TATTGCGATA GAAAAGCCAA GTGTTGATCA GCGTAGTGTA
CAAGAGATCA TCGAACCGGG TGATTATGCG ATCGCAACCT CCGGTGATTA CCGTAACTAC
TTTGAGCAAG ATGGCGTTCG TTACTCGCAT ATCATCGATC CAACTACCGG ACGCCCAATC
AATAACCGCG TGGTCTCCGT GACGGTACTG GATAAGTCTT GTATGACGGC GGATGGCTTA
GCGACAGGCT TGATGGTCAT GGGCGAAGAG CGTGGTATGG CTGTCGCAGA AGCCAACCAG
ATCCCGGTTT TAATGATTGT GAAAACGGAT GATGGCTTTA AAGAGTACGC ATCAAGCAGC
TTTAAACCGT TTTTAAGTAA GTAA
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| Protein sequence | MFFTNWILKV SMVIWFRVSV FPISIFNYER SKQVRNWLVA LASLLLLAGC EKPAEQVHLS
GPTMGTTYNI KYIQQPGIAD SKTLQTEIDR LLEEVNDQMS TYRKDSELSR FNQHTSSEPF
AVSTQTLTVV KEAIRLNGLT EGALDVTVGP LVNLWGFGPE ARPDVVPTDE ELNARRAITG
IEHLTIEGNT LSKDIPELYV DLSTIAKGWG VDVVADYLQS QGIENYMVEI GGEIRLKGLN
RDGVPWRIAI EKPSVDQRSV QEIIEPGDYA IATSGDYRNY FEQDGVRYSH IIDPTTGRPI
NNRVVSVTVL DKSCMTADGL ATGLMVMGEE RGMAVAEANQ IPVLMIVKTD DGFKEYASSS
FKPFLSK
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