Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1863 |
Symbol | proA |
ID | 5136364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1980342 |
End bp | 1981595 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533320 |
Product | gamma-glutamyl phosphate reductase |
Protein accession | YP_001217787 |
Protein GI | 147674854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0014] Gamma-glutamyl phosphate reductase |
TIGRFAM ID | [TIGR00407] gamma-glutamyl phosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000148264 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGATT TAACCGTACT CGGTAAAGCG GCCAAAGCGG CCTCTTTCCA ACTGGCTACC GCCAGTACCG CGCAAAAAAA TCAGGCTCTC GCCAGTATGG CCGATCAGTT GGAAGCGCAA AGCGCGAGCA TTCTTGCTGC AAACGCAAAA GATATTGCGC TGGGGCGCGA AGCGGGTTTG TCTGATGCCA TGCTGGATCG CTTGCTGCTC AATGAGTCTC GCTTGCAAGC AATCGCCAAC GATGTGCGTA ACGTGATCAA ATTGAACGAT CCCGTCGGCA GCGAAATTGA TAGCCGAGTG TTGGAAAACG GCATGTCATT GGCACGCCGT CGCGTCCCCC TTGGTGTGGT CGGCGTCATT TATGAAGCTC GCCCTAACGT CACCATTGAT ATTGCGGCGC TGTGTTTAAA AACCGGTAAC GCCGCGATTT TGCGCGGTGG CAAAGAGACG TTTTTCTCTA ACATGGAACT GGTCAAAGTG ATCCAGTCGG CGTTGGATAA AGCAGGTCTG CCAGCGGCTT CCGTGCAGTA CATTGAAAAG CCAGATCGTG AACTGGTGAC GCAACTCCTG AAAATGGATG ATTACGTCGA CATGATCATC CCACGTGGCG GTGCGGGCCT GCACAAAATG TGCAAAGAAA ACAGCACAGT GCCTGTGATC ATTGGAGGCT TTGGCATTAG CCATATTTTC GTGGATGAAA GTGCTGATCT GGATAAATCG GTTGCCGTAA TTGAAAACGC TAAAGTGCAA CGCCCATCGG CGTGTAATGC GCTAGATACC TTGTTAGTGC ATCAAGCGAT TGCCAAACCG TTACTAGACA AACTCATCGC AAAACTGAAT GGCAAAGTGG CGTTTGTGGC GGAGCCCAAA GCCAAGGCGT TGATGAGTTC AGCGGCTGAG CTGCGTGATG CGCAAGCGGG CGATTTTGAT ACCGAATGGC TCAGCTACAC CTTAGGGGTG AAAGTGGTGC AGGATGTACA AGAAGCCATT GAGCATATGC GCGAGCACAA TGCGAGCCAT TCCGATGCGA TCATGACCAA CGATCTCTAT AACGCTGAGC TGTTTGTGAA TACCGCCGGT TCAGCGGCGG TGTATGTCAA CGCTTCTACG CGTTTTACTG ACGGTGCACA GTTTGGTTTA GGCGCAGAAG TGGCAGTCTC AACACAAAAA CTGCACGCGC GTGGTCCGAT GGGGCTAGAA GAGCTCACCA GCTACAAGTG GGTGGGCAAA GCTAATTACC TGTCACGCAG CTAA
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Protein sequence | MMDLTVLGKA AKAASFQLAT ASTAQKNQAL ASMADQLEAQ SASILAANAK DIALGREAGL SDAMLDRLLL NESRLQAIAN DVRNVIKLND PVGSEIDSRV LENGMSLARR RVPLGVVGVI YEARPNVTID IAALCLKTGN AAILRGGKET FFSNMELVKV IQSALDKAGL PAASVQYIEK PDRELVTQLL KMDDYVDMII PRGGAGLHKM CKENSTVPVI IGGFGISHIF VDESADLDKS VAVIENAKVQ RPSACNALDT LLVHQAIAKP LLDKLIAKLN GKVAFVAEPK AKALMSSAAE LRDAQAGDFD TEWLSYTLGV KVVQDVQEAI EHMREHNASH SDAIMTNDLY NAELFVNTAG SAAVYVNAST RFTDGAQFGL GAEVAVSTQK LHARGPMGLE ELTSYKWVGK ANYLSRS
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