Gene VC0395_A1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1859 
SymbolribB/A 
ID5136075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1976856 
End bp1977965 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content51% 
IMG OID640533316 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 
Protein accessionYP_001217783 
Protein GI147674884 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.114165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTA GCACCCCACA AGAGATCATT GAAGACATTC GTCAAGGCAA AATGGTCATC 
CTGATGGATG ATGAAGATCG TGAAAATGAA GGCGATCTGA TCATGGCGGC TGAGCACATT 
ACGCCAGCAG CGATCAATTT TATGGCAACC CATGGTCGCG GACTCATCTG TTTAACGCTC 
ACGAAAGAGC GTTGTCGCCG TCTGGGTTTA AATCCCATGG TACAAGATAA TAATGCCCAG 
TACACCACCA ATTTCACCGT TTCGATTGAA GCTGCCGAAG GCGTGACCAC CGGTATTTCA 
GCGGCGGATC GCGCGCGCAC AGTACAAGCG GCAGTGGCAA AAGAAGCGAA AGCGGCCGAT 
TTGGTTCAGC CGGGGCATAT TTTCCCGTTG GCTGCACAAG ATGGCGGAGT ATTAACGCGC 
GCTGGGCACA CAGAAGCTGG GTGTGATTTG GCACGCTTGG CAGGTTTAGA GCCCGCGTCG 
GTGATTGTGG AAATTCTTAA TGATGACGGC ACCATGGCGC GTCGTCCGGA CTTAGAAGTG 
TTCGCTGAAA AACACGGCTT AAAGCTGGGT ACGATTGCAG ACTTGATTGA GTACCGCAAC 
CACACCGAAA CCACCATTGA GCGTGTCGCG CAGTGTAAAC TGCCAACCGA ATATGGTGAG 
TTTGAGCTGG TGACTTACCG CGACATCATC GATAAGCAAA TCCACTTTGC TCTGCGTAAA 
GGCGATATTA CTAGTGCGCC AACTCTTGTG CGTGTGCATC TGCAAGATAC TTTTACCGAT 
CTGCTGCACA GCAACCGTGC GGCAGAGCGC AGTTGGCCAC TTGCGACAGC AATGCAGCGT 
ATTGGGCAAG AAGGCGGGGT GTTGGTGATC CTGGGTCATG AAGAATCGAG TGAGCTCTTG 
CTACACCGAG TGAAAATGTT TGAGCTGCAA GATAAAGGCG AAGCCCCTGC GATGGCCAAA 
AAACAAGGCA CTTCACGCCG GGTCGGGGTT GGCTCGCAAA TCCTTGCTGA TCTTGGAGTG 
AAAGAGATGC GTCTGCTCTC TTCACCAAAC AAAAAGTACC ACGCATTGGG TGGTTTTGGT 
CTCAATGTGG TCGAATACGT CTGCGAATAA
 
Protein sequence
MPISTPQEII EDIRQGKMVI LMDDEDRENE GDLIMAAEHI TPAAINFMAT HGRGLICLTL 
TKERCRRLGL NPMVQDNNAQ YTTNFTVSIE AAEGVTTGIS AADRARTVQA AVAKEAKAAD 
LVQPGHIFPL AAQDGGVLTR AGHTEAGCDL ARLAGLEPAS VIVEILNDDG TMARRPDLEV 
FAEKHGLKLG TIADLIEYRN HTETTIERVA QCKLPTEYGE FELVTYRDII DKQIHFALRK 
GDITSAPTLV RVHLQDTFTD LLHSNRAAER SWPLATAMQR IGQEGGVLVI LGHEESSELL 
LHRVKMFELQ DKGEAPAMAK KQGTSRRVGV GSQILADLGV KEMRLLSSPN KKYHALGGFG 
LNVVEYVCE