Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1856 |
Symbol | thiL |
ID | 5135771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1974586 |
End bp | 1975590 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533313 |
Product | thiamine monophosphate kinase |
Protein accession | YP_001217780 |
Protein GI | 147673943 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0611] Thiamine monophosphate kinase |
TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0710389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGTT TCAACCAAAG AGTCTGGATG ATGTTTGGTG AATTTAATTT AATCGATAAA TACTTTTCCA ACCGACAAGC ACAACGCAAA GACGTTCACT TAGCATTGGG TGATGACTGT GCCATTGTCA AAGTTCCTGA AAATTCGCGC GTGGCGATCA GCACGGATAC CTTAGTTGCT GGAACCCATT TTCTGGCTCA GGCCAATCCG GCTTGGGTCG CGCACAAAGC CTTAGCGTCG AACATCAGTG ATTTGGCGGC GATGGGCGCG ACTCCGGCTT GGGTTTCGCT TGCGTTGACT CTGCCTGAGA TTGATGATGC GTGGCTAACG CCATTTTGCG ATGCTTTTTT CGAGTTGGCC AAGTACTACA ATGTGCAGCT CATTGGTGGC GATACCACCA AAGGGCCACT CAGTATCACA TTAACCGTGC AGGGCTTTTT ACCCAAAGAG CAGGCTATGC TGCGTAGCGG GGCGAAAGTT GGCGATTGGC TCTATGTCAC GGGCGATCTA GGCGATAGCC AAGCCGGCTT AGACGTGATT TTAGATCCGG AAAAGCGCCA TTTACCCTTC GCCGATATTC TTGAGCAGCG CCATTACTTG TCGACACCAC GCATTGTGGC AGGGCAAGCC TTAGTGCATT TGGCCTCTTC GGCGATTGAT ATTTCCGACG GCCTGATTGC CGATCTGCAA CACATTTTGC GGCGTTCCAA TGTTGGGGCG AGTATTGATG TCAGCTTGTT GCCGCTGTCT AAAGAGTTAT TGCAGTTTGT AGACAGTGTC ACTAGTGCAC AGCAGTATGC CTTGACCAGC GGTGAAGAGT ACGAACTCTG CTTCACCATT CCAGAAGAAA ATCGAGGCTC GCTAGAAAAT GCGCTCGCAC ATTGCGGCAC GAAAGTGACC TGTATTGGCC AAATTCGCCC GGCCGGTACG TTTGAGCTGC ACAATCAGGG GAAAAAGCTC GATTGGCAAC TGGCTGGGTA TGATCATTTC AAGGTGAAAG CATGA
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Protein sequence | MQRFNQRVWM MFGEFNLIDK YFSNRQAQRK DVHLALGDDC AIVKVPENSR VAISTDTLVA GTHFLAQANP AWVAHKALAS NISDLAAMGA TPAWVSLALT LPEIDDAWLT PFCDAFFELA KYYNVQLIGG DTTKGPLSIT LTVQGFLPKE QAMLRSGAKV GDWLYVTGDL GDSQAGLDVI LDPEKRHLPF ADILEQRHYL STPRIVAGQA LVHLASSAID ISDGLIADLQ HILRRSNVGA SIDVSLLPLS KELLQFVDSV TSAQQYALTS GEEYELCFTI PEENRGSLEN ALAHCGTKVT CIGQIRPAGT FELHNQGKKL DWQLAGYDHF KVKA
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