Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1852 |
Symbol | map |
ID | 5136522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1969803 |
End bp | 1970645 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640533309 |
Product | methionine aminopeptidase |
Protein accession | YP_001217776 |
Protein GI | 147674261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000190489 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATAA AAATCAAGAA TGCCGTAGAA ATTGAAAAAA TGCGCGTTGC GGGCCGCTTA GCCGCTGAAG TTCTGGAAAT GATTGAACCT CATGTGAAAG CAGGCGTGAC TACCGAAGAG CTGGATCAGA TATGTCATAA GTACATTACT GAAGTTCAAG GCGCGATTCC GGCACCACTG AATTATCACG GTTTTCCAAA ATCGATCTGT ACGTCGATCA ACCACATTGT CTGCCACGGC ATTCCTGCCA GTGAAGATAC TTATTTTGGT CAGATCCAAC GTCCTGCGGT ACTGCGTGAT GGCGACATCC TTAATATCGA TATTACGGTT ATCAAAGACG GCTACCACGG CGATACCTCA AAAATGTTTT TGATTGGCGA TGTGTCGATT GAAGACAAAC GCCTGTGTCA TGTGGCGCAA GAGTGCCTTT ACTTGGCACT GAAACAAGTC AAGCCGGGCG TTCAATTGGG CGAAATTGGA ACCACGATTG AAAAACACAT CAAGACCAAC AACAAAAACA ACCCGCGCTT TAAATTCTCT ATCGTGCGTG ATTACTGTGG TCACGGCATT GGTGCTGAGT TCCATGAAGA GCCACAAGTG GTGCACTACA AAAACAGTGA CCGCACTGTG CTGCGTGAAG GGATGATTTT CACCATTGAG CCCATGATTA ACGCCGGTAA ATTTGGCTGC CGTCTTGATG ATGAAGATAG CTGGACGGTC TACACCGCCG ATGGCAAAAA ATCTGCCCAG TGGGAACATA CGATTTTGGT CACTGCAACT GGCTGTGAAA TCCTGACGCT ACGTAGTGAA GAAAGCCTGC CACGCATCTT GAATAACGCC TAA
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Protein sequence | MSIKIKNAVE IEKMRVAGRL AAEVLEMIEP HVKAGVTTEE LDQICHKYIT EVQGAIPAPL NYHGFPKSIC TSINHIVCHG IPASEDTYFG QIQRPAVLRD GDILNIDITV IKDGYHGDTS KMFLIGDVSI EDKRLCHVAQ ECLYLALKQV KPGVQLGEIG TTIEKHIKTN NKNNPRFKFS IVRDYCGHGI GAEFHEEPQV VHYKNSDRTV LREGMIFTIE PMINAGKFGC RLDDEDSWTV YTADGKKSAQ WEHTILVTAT GCEILTLRSE ESLPRILNNA
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