| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1847 |
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| Symbol | uppS |
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| ID | 5137121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1965386 |
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| End bp | 1966156 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533304 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001217771 |
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| Protein GI | 147675134 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000092739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTCGTTG TGTTTCTTAT GCAAAATCTA TCTCTTTCCC AAGATGTATT GCCTAAACAT
ATTGCCGTCA TTATGGATGG TAATGGTCGT TGGGCGAAAG CGCAGGGAAA ACCGCGTGTT
TTCGGCCATA AAAATGGTGT GGCTGCGGTA CGAAAAACCA TCTCTACTTC TGCTCGCCTT
GGCATTAAAG CCGTAACTCT GTTTGCTTTT AGCAGCGAGA ACTGGCGTCG TCCGGAAGAA
GAAGTGGGCG TGTTGATGGA ACTTTTTATG ACGGTTCTTT CAACCGAAAT TAAGAAATTG
CATAAAAACA ATCTGCGTTT GCGAGTGATC GGTGATAAAA GCCGCTTTAG TGAGCGTCTG
CAAACGAAAA TCGCGCAAGC GGAGCAGTTA ACCGCCAGCA ATACCGGCAT GGTGGTCAAC
ATCGCTGCGA ACTACGGTGG ACAGTGGGAT ATCTTGCAAG CTACTCAAGC ATTGGCTGAA
AAGGTTACCC AAGGTGAACT GCAACCGTCG GACATCGATG AAGACGTATT TAAGCAGCAT
TTGACTATGG CTGATCTGCC GGATGTGGAT TTGTTGATCC GCACCAGTGG AGAGTGCCGC
ATTAGTAATT TTATGCTTTG GCAACTTGCC TATGCAGAAA TGTATTTCAC TCCAGTCTTC
TGGCCTGAGT TCGATGAAAA CTGCCTGATT GAAGCAGTGA CTTGGTTTGT TAATCGTGAG
CGCCGTTTTG GCTGTACTGG TGAACAAGTC AAGGCATTGA TGGAAAACTG A
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| Protein sequence | MFVVFLMQNL SLSQDVLPKH IAVIMDGNGR WAKAQGKPRV FGHKNGVAAV RKTISTSARL
GIKAVTLFAF SSENWRRPEE EVGVLMELFM TVLSTEIKKL HKNNLRLRVI GDKSRFSERL
QTKIAQAEQL TASNTGMVVN IAANYGGQWD ILQATQALAE KVTQGELQPS DIDEDVFKQH
LTMADLPDVD LLIRTSGECR ISNFMLWQLA YAEMYFTPVF WPEFDENCLI EAVTWFVNRE
RRFGCTGEQV KALMEN
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