| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1840 |
|---|
| Symbol | fabZ |
|---|
| ID | 5136769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1957328 |
|---|
| End bp | 1957789 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640533297 |
|---|
| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
|---|
| Protein accession | YP_001217764 |
|---|
| Protein GI | 147674767 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0477677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTT TGACTACTGA TAAGAAAACG ATGAATATCA CTGAAATTCA ATCGCTTCTG
CCTCACCGCT ATCCATTTTT ACTGATTGAT CGCGTGACCG ACTATGAAGA AGGTAAGTAC
CTGATTGGTT TGAAAAATGT TTCAGTGAAT GAGCCTCAGT TTACGGGTCA CTTTCCACAA
CTGCCGGTTT TCCCCGGTGT ATTGATTTTA GAAGCCATGG CTCAAGCCAC TGGTCTGTTG
GCGTTCAAAA CCTTTGGTGC GCCAAAAGAG AATGAACTGT ACTATTTTGC CAGCATTGAT
GAAGCTAAGT TCCGTAAGCC AGTGACACCG GGCGATCAAC TGATGATTGA AGTTGAATTC
CTTAAAGAGC GTCGTGGTAT CGCGCTGTTT AACGGCGTGG CCAAAGTCGA TGGTGATGTG
GTCTGTTCTG CTCAACTGAA ATGCGCACGT CGAGAGTTTT AA
|
|---|
| Protein sequence | MMTLTTDKKT MNITEIQSLL PHRYPFLLID RVTDYEEGKY LIGLKNVSVN EPQFTGHFPQ
LPVFPGVLIL EAMAQATGLL AFKTFGAPKE NELYYFASID EAKFRKPVTP GDQLMIEVEF
LKERRGIALF NGVAKVDGDV VCSAQLKCAR REF
|
|---|
| |