| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1824 |
|---|
| Symbol | |
|---|
| ID | 5136203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1940099 |
|---|
| End bp | 1941358 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640533281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217748 |
|---|
| Protein GI | 147674375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03503] conserved hypothetical protein TIGR03503 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGGA TTCTCGCGGC GATAGTGGGA TGTTTGATCA GTTTGAGTAG TCTAGCGGCA
CAACAATCTA GCATGTCGCT GCTCGATAAC CGTTTTCGCG TTGATCCGAC CATAACCCAA
ATCACCTTTG TGATTTACCG CGAAAAAGAT TCTCAACCAG TCGTGTTAGT TCGCCCTGAT
GGCAGTAAGT ATTATCAGTG GCGTAATCCT GAAAATGTGC GCTGGTATCA AGAATCCTCG
ATGGACATCA TCTCGATTGA GAATCCTATG CCGGGGCCTT GGCAGGCAAT CGGTAAAGTC
ACACCGAAAA ACAACATCAA ACTTATCTCC AATCTACAAC TCACGACCGA CGTCTTTCCG
AGCCGAGTGT TTCAAGGGGA AGAATTTAAA TTTACCGCAC GCTTAACGTC GGACGGTAAA
CCTTTGCTAT TGCGCGATTT TTTAGATCGA GTCAACCTCA AAGTGACCTT CACCAAGTTT
GTTGAAAATG AAGATTCTCT CGCTAAGGAA GCACGACCCA TCCCCGAAGT GCTCGGAGAA
TTTGCCGATG ATGGTACTTT GCTTGATGAA AAGCCCGGCG ATGGCGTGTT CACGGTGGCT
TTAAAAATGG CGATTGAACC GGGCAAATAC CGTGTACGAA TTACCTCAGG AAATGGCGTT
TTTCTGCGTG CGCAAGAGCA AGAGGTGTTA GTTTACCCAA CGCCGATTTC GACCACTTTC
ATTCAATCGC GCTTAACGGG CGCACCGCAT CAGGTGCTGT TTACGGGAGA GCAGGGGATG
ATTGAGCCCG GTTCATTAGT GGCTCATATT CGTCATCGCC ACCCTTATCA AGATGATTAC
ATCGCGCAGG CGCAATCAGG CAAAGAATCC TTGACCGCTA AGTTGACCAT TCCCTATGAC
GGTCAGTTTG GTAACTACTC TTGGGATGGA AAAGTGTGGG CGACCGAACT TGCTTCACAA
CGTGAACTCT ATTTCCCGAT TGGCGATCAA ACCTACAGTG TGGTCGATGA GCTTAATATT
GCCGAAGTGC GTCGAATTCA GGAAGAAGAG GAAGCTTTAC GCCTGAAACA AGAGCAAGAG
CTGTTGATCA TTCAGATGCG CGAAGAGCAG CGTAGCCGCA ACATGATGTA CATCATAGTA
GGTAATATCG TGGTACTGAT CTTGGCATTA GCCGTTTGGT TTGTACTGCG TAAGATCAAA
ATGAAAAAAG CTGCTGTACC GGAAATGCAG CTAAATATGC CGCCTAAGAA GGGGAAGTAA
|
|---|
| Protein sequence | MLRILAAIVG CLISLSSLAA QQSSMSLLDN RFRVDPTITQ ITFVIYREKD SQPVVLVRPD
GSKYYQWRNP ENVRWYQESS MDIISIENPM PGPWQAIGKV TPKNNIKLIS NLQLTTDVFP
SRVFQGEEFK FTARLTSDGK PLLLRDFLDR VNLKVTFTKF VENEDSLAKE ARPIPEVLGE
FADDGTLLDE KPGDGVFTVA LKMAIEPGKY RVRITSGNGV FLRAQEQEVL VYPTPISTTF
IQSRLTGAPH QVLFTGEQGM IEPGSLVAHI RHRHPYQDDY IAQAQSGKES LTAKLTIPYD
GQFGNYSWDG KVWATELASQ RELYFPIGDQ TYSVVDELNI AEVRRIQEEE EALRLKQEQE
LLIIQMREEQ RSRNMMYIIV GNIVVLILAL AVWFVLRKIK MKKAAVPEMQ LNMPPKKGK
|
|---|
| |