Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1809 |
Symbol | chb-2 |
ID | 5135410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1924828 |
End bp | 1927479 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533266 |
Product | beta-N-acetylhexosaminidase |
Protein accession | YP_001217734 |
Protein GI | 147673355 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGA AGAGTCTTAT CTCGATCGCG GTATTCACTT CATTAAGTGG CTGCGCACTC AACACTACGT CACCACAAGA GGTGGTAGAC ACATTAGCGA ATAACTTGGA TGTGCAATAC CAAGTGGTCA ACAATCACGG CGCGGATACT GGTTTGGCTT GTCAAACTCT AGAAGCTGAG TGGGCTTCTT GTAACCAAGT GAATATGACC TTGGTTAACC GTGGTGAGGC GGTCAATTCA AAAGATTGGG CTATTTACTT CCACAGTATT CGCTTGATCC TCGATGTGGG GAATGACCAG TTCAAAATTA CTCGCGTTAC CGGCGACCTA CATAAACTGG AACCTACCGA TAAGTTTGAT GGTTTTGCCG CAGGTGAAAC GGTGACTTTG CCGCTGATTG GTGAATACTG GACGCTGTTT GAAACGGACT TTATGCCACG CGCTTTTGTC ACCGCACCGG ATGCCGAGCC AAAAGTCATT GCGGCTTTAA ATACCGAGGA CGTGGCAAGC TTTGTCAGCG GACTGGAGGG TGAAAACCTT AAGCGCACTC CGAGTGACAA CAATGTATTC GCTCAAGCGC TGTCTCGCTT TGAAAAGAAC AGTGATGTTG CGCTGCAAGA TGTGACACAC GCACTCATCC CAACGCCACT GCAAGTGAAA TCGCATAGCG GATCTGTCTC TATCGCTAAA GGTATCGCGC TGCCAAGCAA AGCGTTTGAC GGTGAGCAAA TGCAAGCGCT GAATGAGCGC GCACAACTGC TTGGCGTGAA TCTGAAAGGG GTGATGCCGG CGCAAGTTAT TATCAATCCT AAATCTTTTA AAGGTGACTT GGCTAAATCT GGTGCGTATC GCCTAGCGAT TACGGATAAA GCCGTTAAAG TGACTGCATT TGACCAAGCA GGAGCCTTCT ATGCGATGCA ATCGCTGCTG GGTTTAGTCG ATATGGCCGA TGCCACTCAA CTGCCAAAGG TTGAAATCGT CGATGCTCCT CGTTTTGATT ATCGCGGTGT GATGGTGGAT GTAGCGCGTA ACTTCCACTC TAAGCAAGCG ATTCTGGCGA CCTTGGATCA AATGGCGGCT TATAAAATGA ATAAGCTGCA TCTGCACCTG ACTGATGACG AAGGCTGGCG TATTGAAATT CCGGGCTTAC CTGAGCTGAC GGATATCGGC GCTCAACGCT GTTTTGACCC GAGTGAAACA GAATGCGTGT TGCCACAGCT TGGCTCTGGT CCAAACGCCG ATAACTTTGG CTCTGGTTAT TTCACCAAGC AAGATTATTT AGAGATCCTG CAATACGCGA AAGCACGTCA TATCGAAGTG ATCCCTGAGA TTGATATGCC AGCGCACGCT CGTGCGGCCG TGGTTTCAAT GGAGGCGCGT TACCAACGTT TAATGCAAGA GGGCAATGAG GCGGCGGCCA ATGAGTTCCG TTTGCTGGAT CCGCAAGATA CCTCTAACGT CACCACAGTG CAGTTCTATG ATCGCATGAG CTTTATCAAT CCATGTTTGG ACTCTTCCAA ACGCTTTGTG GATAAAGTGA TCTCTGAGAT TGCGGCAATG CATCAAGCGG CGGGTATGCC TCTGACGACA TGGCACTTTG GTGGCGATGA AGCGAAAAAC ATCAAGCTTG GCGCAGGCTT CCAAGATGTG AATACCCAAG AGCCAGTAAG TTGGAAAGGC AACTTGGATC TGAGCAAGCA AGATAAGCCA TTTGCGCGTT CGCCGCAGTG CCAAAACTTG ATTGCAACAG GTGCGGTGAG TGATTTCGGC CATTTACCAA GCTACTTTGC TGAGCAAGTG TCTAAGTTGG TTGCCGAGAA AGGGATTCCT AACTTCCAAG CATGGCAAGA TGGCTTGAAA TACAGCGAAG GCGAAAAAGC GTTCGCAACC GAAAACACAC GTGTGAACTT CTGGGATGTA CTGTACTGGG GCGGCTCTGC TTCTGCGTAC GAATGGGCTG AGAAAGGCTA CGATGTGATC ATCTCTAACC CTGACTACGT GTACATGGAT ATGCCTTACG AAGCTGACCC GAAAGAGCGT GGCTACTACT GGGCAACGCG TGCAACCGAC ACTCGTAAGA TGTTTGGTTT TGCACCAGAA AACTTGCCAC AAAACGCAGA AACCTCACTG GATCGTGATG GTAATGGCTT CAGCGGTAAA GGCGAAGTGA AAGGTAAGCC TTTCTATGGT CTGTCTGCGC AGCTGTGGTC TGAAACCGTA CGTACTGATG AGCAGTATGA ATACATGGTA TTCCCTCGCG TTCTCGCCGC TGCTGAGCGC GCATGGCACC GTGCAGAGTG GGAAAACGCC TATAAAGTTG GCGTCGAATA TTCGCAAGAG ACTCAGTTGG TTAACCATAA AGCGCTGAAC GCAGATTGGA ATCGCTTTGC TAACGTATTA GGTCAACGTG AGCTGGCTAA ACTTGAGAAA GCAGGCATTG ATTACCGCCT CCCAGTTCCG GGAGCCAAGA TCGAGAACGG TCATTTGGCC ATGAACGTTC AGTTCCCAGG TGTCACACTG CAATACTCAC TGGATGGTCA AACTTGGTTG GATTATGACG CGAAGCAAGC GCCAAAAGTG AGCGGAGAAG TTTGGATTCG CTCGGTGTCT GCCAGCGGTG AGCGCACTAG CCGAGTCACT TCACTGAAAT AA
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Protein sequence | MLKKSLISIA VFTSLSGCAL NTTSPQEVVD TLANNLDVQY QVVNNHGADT GLACQTLEAE WASCNQVNMT LVNRGEAVNS KDWAIYFHSI RLILDVGNDQ FKITRVTGDL HKLEPTDKFD GFAAGETVTL PLIGEYWTLF ETDFMPRAFV TAPDAEPKVI AALNTEDVAS FVSGLEGENL KRTPSDNNVF AQALSRFEKN SDVALQDVTH ALIPTPLQVK SHSGSVSIAK GIALPSKAFD GEQMQALNER AQLLGVNLKG VMPAQVIINP KSFKGDLAKS GAYRLAITDK AVKVTAFDQA GAFYAMQSLL GLVDMADATQ LPKVEIVDAP RFDYRGVMVD VARNFHSKQA ILATLDQMAA YKMNKLHLHL TDDEGWRIEI PGLPELTDIG AQRCFDPSET ECVLPQLGSG PNADNFGSGY FTKQDYLEIL QYAKARHIEV IPEIDMPAHA RAAVVSMEAR YQRLMQEGNE AAANEFRLLD PQDTSNVTTV QFYDRMSFIN PCLDSSKRFV DKVISEIAAM HQAAGMPLTT WHFGGDEAKN IKLGAGFQDV NTQEPVSWKG NLDLSKQDKP FARSPQCQNL IATGAVSDFG HLPSYFAEQV SKLVAEKGIP NFQAWQDGLK YSEGEKAFAT ENTRVNFWDV LYWGGSASAY EWAEKGYDVI ISNPDYVYMD MPYEADPKER GYYWATRATD TRKMFGFAPE NLPQNAETSL DRDGNGFSGK GEVKGKPFYG LSAQLWSETV RTDEQYEYMV FPRVLAAAER AWHRAEWENA YKVGVEYSQE TQLVNHKALN ADWNRFANVL GQRELAKLEK AGIDYRLPVP GAKIENGHLA MNVQFPGVTL QYSLDGQTWL DYDAKQAPKV SGEVWIRSVS ASGERTSRVT SLK
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