| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1805 |
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| Symbol | ompA |
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| ID | 5135297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1918636 |
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| End bp | 1919601 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533262 |
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| Product | outer membrane protein OmpA |
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| Protein accession | YP_001217730 |
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| Protein GI | 147673624 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TAGCGGCAAT TATTTCAGCG ACGTTACTTT TTGCTTCTTC TGCGGCAGTG
GCAGAGGTGT ATGTCGGAGG TAAGGTCGGT AAATCTTGGT TGGATGACGC GTGTCTAGCT
GGTCAATCTT GTGAAGATGA TGATCAGGTT GTAGGCGCGT TTCTGGGTTA CCAAGCAAAC
AAATGGCTCT CTCTGGAAGC AGGCTACGAC TACTTAGGTA AGTTTACTGC TGCTGGATTG
AATGATGAGA AGGTACAAGC GGTAACGCTA GCACCAAAAC TCAGCATTCC TCTGACCGAA
GGCATTGCGC TGTACGGTAA AGTGGGTGGT GCTTATGTCG ATTACGGCAG CAAGGACGAC
TACTCATACC TAGGTGCAGC AGGCCTAGAG TTCAACACTA ACCACAATGT CACTATGCGT
TTGGAATACC AAAACCTGAC TGACATTAAT AACGACATCG TACGTGCACG CGCAGAAACC
GCTACACTCG GTATCGCTTA TAAGTTCGGT GGCAGTGAAG AGCCAGCACC AGTGGTAGAA
CAGCGTCCAG CTGAGCCTGC ACCTGTTGCC GCACCAGTCG AGAAAGTGGC AGTCACTAAA
ACCTTTACTT TCCAACATCT GGATAGCAGC ACCTTTGCTA CTGCAAGTGC TGAGCTAAAA
CCAGCAACGG TTCAGAAGCT GGATAAAATT GTGGGTTACC TAAACCAATA CCCACAAGCA
AAAGTAGAAG TAGTTGGTCA CACAGACTCA ACAGGTTCTG AAGCTTACAA CCAAAAACTG
TCTGAGCGTC GTGCTCAAGC AGTAGCGAAA GCACTAGAAG CTCAAGGTAT TGATGCATCT
CGTATTTCAG CTAAAGGTCT AGGCGAAAGC AGCCCAATCG CTTCTAACGC GACAGCAGAA
GGTCGTGAGA AGAACCGTCG TGTTGAGCTA GTGATCCCTG AATTCCAGTA CCAAGTTACT
GAATAA
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| Protein sequence | MKKLAAIISA TLLFASSAAV AEVYVGGKVG KSWLDDACLA GQSCEDDDQV VGAFLGYQAN
KWLSLEAGYD YLGKFTAAGL NDEKVQAVTL APKLSIPLTE GIALYGKVGG AYVDYGSKDD
YSYLGAAGLE FNTNHNVTMR LEYQNLTDIN NDIVRARAET ATLGIAYKFG GSEEPAPVVE
QRPAEPAPVA APVEKVAVTK TFTFQHLDSS TFATASAELK PATVQKLDKI VGYLNQYPQA
KVEVVGHTDS TGSEAYNQKL SERRAQAVAK ALEAQGIDAS RISAKGLGES SPIASNATAE
GREKNRRVEL VIPEFQYQVT E
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