Gene VC0395_A1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1795 
SymbolflgA 
ID5136236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1902384 
End bp1903151 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID640533252 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_001217720 
Protein GI147674697 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC CAGAGAAACG AAAAATGCAT CCGAAGATCG ATCTCCATTC GCATTTCATA 
ACTAAGTGTA GAGCTTTCTG TGAAATATTT TATAGCTTTA TCGGCTTTTT ATTATTTTTC
TTTAGTCTAG CGGCCAATGC AGCCACGCCG GAACAGCTTT CAATGATCAA AGAAGCCGCC
GAAAATCATG TGCTGAGCAC GGTGGATATG CCTGCTGGCG GTGAGTTAGT GGTCAATGCT
GCCAATATAG ACGATCGTCT ATTCGCGACC GATTGTCCGG AACCTCTCAC AACAAATTCA
TCATCCAGCA ATGGTTCTGC GGCCAACATC ACCGTATTGG TGGAGTGTAA ACCGGATAAC
TGGCGTGTTT ATGTGCCGGT TCGTCTGACG ATCACTATCC CACTCATCAC TGCGGCAACC
CCATTAAGTC GGGGACAAAT GATTTCCGCA CAAGATGTTA CGTTAAGTAT GGTAGACCTG
CTGCGTTTCC GGCGGCAAGG TTTTTCCACT CCTGAAAACG TGATTGGTGC AAAAATCAAA
AAAAATATTC GTGTGGGTGA TGTGATTGAA CAGAACGATG TGTGCATCGT GTGTCGAAAT
GAAAGTGTTG TCATCCGAGC GGGAAAATCT GGTATGTCGA TCACAACCAA AGGGACGGCG
ATGTCCGATG GTGTCGTGGG AGAGCAGATA AAAGTGAAAA ATGACAAATC TAACCGTATA
ATTGATGCGC AAGTCAGTGG TGTTGGTGAG GTCACCGTCG CGTTTTGA
 
Protein sequence
MKKPEKRKMH PKIDLHSHFI TKCRAFCEIF YSFIGFLLFF FSLAANAATP EQLSMIKEAA 
ENHVLSTVDM PAGGELVVNA ANIDDRLFAT DCPEPLTTNS SSSNGSAANI TVLVECKPDN
WRVYVPVRLT ITIPLITAAT PLSRGQMISA QDVTLSMVDL LRFRRQGFST PENVIGAKIK
KNIRVGDVIE QNDVCIVCRN ESVVIRAGKS GMSITTKGTA MSDGVVGEQI KVKNDKSNRI
IDAQVSGVGE VTVAF