Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1795 |
Symbol | flgA |
ID | 5136236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1902384 |
End bp | 1903151 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640533252 |
Product | flagellar basal body P-ring biosynthesis protein FlgA |
Protein accession | YP_001217720 |
Protein GI | 147674697 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC CAGAGAAACG AAAAATGCAT CCGAAGATCG ATCTCCATTC GCATTTCATA ACTAAGTGTA GAGCTTTCTG TGAAATATTT TATAGCTTTA TCGGCTTTTT ATTATTTTTC TTTAGTCTAG CGGCCAATGC AGCCACGCCG GAACAGCTTT CAATGATCAA AGAAGCCGCC GAAAATCATG TGCTGAGCAC GGTGGATATG CCTGCTGGCG GTGAGTTAGT GGTCAATGCT GCCAATATAG ACGATCGTCT ATTCGCGACC GATTGTCCGG AACCTCTCAC AACAAATTCA TCATCCAGCA ATGGTTCTGC GGCCAACATC ACCGTATTGG TGGAGTGTAA ACCGGATAAC TGGCGTGTTT ATGTGCCGGT TCGTCTGACG ATCACTATCC CACTCATCAC TGCGGCAACC CCATTAAGTC GGGGACAAAT GATTTCCGCA CAAGATGTTA CGTTAAGTAT GGTAGACCTG CTGCGTTTCC GGCGGCAAGG TTTTTCCACT CCTGAAAACG TGATTGGTGC AAAAATCAAA AAAAATATTC GTGTGGGTGA TGTGATTGAA CAGAACGATG TGTGCATCGT GTGTCGAAAT GAAAGTGTTG TCATCCGAGC GGGAAAATCT GGTATGTCGA TCACAACCAA AGGGACGGCG ATGTCCGATG GTGTCGTGGG AGAGCAGATA AAAGTGAAAA ATGACAAATC TAACCGTATA ATTGATGCGC AAGTCAGTGG TGTTGGTGAG GTCACCGTCG CGTTTTGA
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Protein sequence | MKKPEKRKMH PKIDLHSHFI TKCRAFCEIF YSFIGFLLFF FSLAANAATP EQLSMIKEAA ENHVLSTVDM PAGGELVVNA ANIDDRLFAT DCPEPLTTNS SSSNGSAANI TVLVECKPDN WRVYVPVRLT ITIPLITAAT PLSRGQMISA QDVTLSMVDL LRFRRQGFST PENVIGAKIK KNIRVGDVIE QNDVCIVCRN ESVVIRAGKS GMSITTKGTA MSDGVVGEQI KVKNDKSNRI IDAQVSGVGE VTVAF
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