Gene VC0395_A1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1787 
SymbolflgG 
ID5136046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1895729 
End bp1896517 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID640533244 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_001217712 
Protein GI147674573 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCAG CACTATGGGT CAGTAAGACC GGCTTAGATG CCCAACAAAC CAACATTGCA 
ACGATTTCCA ACAACCTTGC CAACGCCTCA ACCATTGGCT TTAAAAAAGG GCGGGCGGTG
TTTGAAGATC TGTTTTACCA AAACATTAAC CAGCCGGGAG CACAATCCTC GCAAAACACT
CGTTTGCCGA GTGGTTTGAT GTTAGGCGCG GGCTCTAAGG TCGTGGCAAC CCAAAAGGTA
CACACGAACG GTAACGTACA AACGACCTCC AACAGTTTGG ACATGATGAT TGAAGGCGAC
GGTTTTTTCC AAATTCTGAT GCCAGATGGC AACATTGCCT ATAGCCGAAA TGGTCAGTTC
ACCTTGGATG ATGAAGGCGC GATTGTGACC TCTGGTGCGG GCTACCGTTT ACAACCTGAA
ATCATCATTC CCGAAGACGC TATTTCCATC ACGATTGGTA ATGATGGTGA AGTGTCGGTT
CGTGTCCGTG GTCAGCAGGA TAACCAAGTA CTGGGGCAGA TCACTACGGT TGATTTCATT
AACCCCGGCG GTTTAGAGCC GGTTGGACAA AACCTTTACC TACCAACCGG AGCCAGTGGT
GAGCCACAAG AAGGGGTTCC GGGCTTGGAT GGTTTGGGGG ATATTCGCCA ATCTATGCTC
GAAACCTCGA ACGTGAATGT GACGGAAGAG TTGGTCAACA TGATTGAAGC GCAGCGTGTG
TACGAGATGA ACTCTAAAGT TATCTCCGCC GTCGATAAGA TGATGAGCTT CGTTAACCAA
CAACTGTAA
 
Protein sequence
MQPALWVSKT GLDAQQTNIA TISNNLANAS TIGFKKGRAV FEDLFYQNIN QPGAQSSQNT 
RLPSGLMLGA GSKVVATQKV HTNGNVQTTS NSLDMMIEGD GFFQILMPDG NIAYSRNGQF
TLDDEGAIVT SGAGYRLQPE IIIPEDAISI TIGNDGEVSV RVRGQQDNQV LGQITTVDFI
NPGGLEPVGQ NLYLPTGASG EPQEGVPGLD GLGDIRQSML ETSNVNVTEE LVNMIEAQRV
YEMNSKVISA VDKMMSFVNQ QL