Gene VC0395_A1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1762 
Symbol 
ID5137906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1882497 
End bp1883588 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content49% 
IMG OID640533219 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001217701 
Protein GI147674921 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000606508 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA AATGTGGCAT CGTCGGTTTG CCAAACGTAG GTAAATCAAC TCTTTTTAAT 
GCGCTGACCA AAGCGGGCAT CGAAGCAGCT AACTTCCCGT TTTGTACTAT CGAACCAAAT
ACAGGCGTTG TGCCTGTACC AGATCCGCGT CTGGATGCCT TAGCCGCGAT TGTCAAACCT
GAACGCATTC TGCCAACGAC GATGGAGTTT GTGGACATTG CAGGTCTAGT GGCGGGCGCA
TCAAAAGGAG AAGGTCTAGG TAACAAATTC CTCGCTAACA TCCGTGAAAC TGATGCAATT
GGTCACGTAG TACGCTGCTT TGAAAACGAA AACATCATTC ACGTGGCGGG TAAAGTGTCA
CCGCTGGAAG ACATCGAAAT CATCAATCTT GAATTAGCGC TGGCTGACTT AGACAGCTGC
GAGCGCGCGA TTCTGCGTCA AAGCAAACGC GCTAAAGGTG GCGATAAAGA AGCCAAATTT
GAACTCGCGG TACTTGAAAA GCTGCAACCT GTTCTGAGCG AAGGCCAATC GGCTCGTTCC
GTCAACCTAA CCAAAGAAGA ATTACTGGCC GTCGGTTATT TAAACCTGCT GACGCTAAAA
CCCACCATGT ACATTGCGAA CGTCAATGAA AATGGTTTTG AAAACAACCC ATATCTGGAT
GCGGTGGTTG AGTTCGCAGC CAAAGAAAAT GCTTCTGTGG TAGCGGTTTG TGCAGCGATC
GAGGCGGAAC TGTCTGAACT TGAAGAAGAA GAACGCGATG AGTTCTTAGC CGACCTCGGT
ATTGAAGAGC CAGGCCTCAA CCGCGTGATT CGCTCAGGTT ATGACCTACT CAATCTGCAA
ACTTACTTCA CCGCAGGCGT GAAAGAAGTG CGCGCATGGA CCATTCCTGT CGGTGCGACC
GCACCACAAG CCGCGGGTAA GATCCACACA GACTTCGAGC GTGGTTTTAT TCGTGCTGAA
GTGATCGGTT ACAATGACTA CATCCAATTC AATGGTGAGT CAGGTGCCAA AGATGCCGGT
AAATGGCGCT TGGAAGGTAA AGAGTACATC GTAAAAGATG GCGATGTAAT CCACTTCCGC
TTCAACGTTT AA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVKP 
ERILPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFENE NIIHVAGKVS
PLEDIEIINL ELALADLDSC ERAILRQSKR AKGGDKEAKF ELAVLEKLQP VLSEGQSARS
VNLTKEELLA VGYLNLLTLK PTMYIANVNE NGFENNPYLD AVVEFAAKEN ASVVAVCAAI
EAELSELEEE ERDEFLADLG IEEPGLNRVI RSGYDLLNLQ TYFTAGVKEV RAWTIPVGAT
APQAAGKIHT DFERGFIRAE VIGYNDYIQF NGESGAKDAG KWRLEGKEYI VKDGDVIHFR
FNV