| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1755 |
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| Symbol | hemK |
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| ID | 5135434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1875866 |
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| End bp | 1876726 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533212 |
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| Product | hemK protein |
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| Protein accession | YP_001217694 |
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| Protein GI | 147674049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000114264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTTA CCATTGAAGC GGCATTAAAA GCGGCAACCG AGCAACTGCA GCAAAGCGGC
AGTGATTCGC CAGCCCTAGA TGCCGCAGTA CTCCTTTGCC ATGTACTGGC TAAGCCTCGT
TCTTACTTGT TGACTTGGCC TGATAAAATC TTGGAGAAGC CTACTTTGGC TTCTCTCGAG
CTGCTCCTTG CTCGCCGCAG AGCGGGAGAG CCGATGGCCT ACATCCTTGG TGAGCGCGAA
TTTTGGTCGC TGCCGCTGAA AGTCTCTCCT TCGACACTTA TTCCACGTCC GGATACGGAA
CGTTTGGTTG AATTAGCGCT GGATAAAGCG GCGTTGATTG ATGGCGAACT GCTGGATCTT
GGCACCGGAA CTGGGGCGAT TGCGTTGGCT TTGGCTTCGG AATTGCCCAC GCGGCAAGTC
ACGGGGATTG ATTTACGTCC GGAGGCGGCA GAGTTAGCAA GAGAAAACGC GACTCGCTTG
GCGATCCACA ATGCGCAGTT TTTTCAGGGC AGTTGGTTTA GCCCATTAGC AGACGGTACG
AAGTTTGCTT TGATCGTCTC CAACCCGCCT TATATCGAAG AAAATGATCC GCATTTGAGT
CTGGGCGATG TGCGTTTTGA GCCGAAAAGC GCGCTGGTTG CCGCAGAAAA TGGTTTGGCG
GACATTCGCC ACATCAGCAC GCACGCGCCG CGTTTTTTGC TCGATGACGG CTGGCTTTTG
TTTGAGCATG GTTACGATCA AGGCGTTGCG GTGCGCACGA TTATGAGTGA TTTAGGCTAT
CAAAACATCA TGACCGAGCA AGATTACGCC GGTCATGATC GAGTTACACT GGGACAATAT
AAAACGGAAA GAGAAGCATA A
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| Protein sequence | MSVTIEAALK AATEQLQQSG SDSPALDAAV LLCHVLAKPR SYLLTWPDKI LEKPTLASLE
LLLARRRAGE PMAYILGERE FWSLPLKVSP STLIPRPDTE RLVELALDKA ALIDGELLDL
GTGTGAIALA LASELPTRQV TGIDLRPEAA ELARENATRL AIHNAQFFQG SWFSPLADGT
KFALIVSNPP YIEENDPHLS LGDVRFEPKS ALVAAENGLA DIRHISTHAP RFLLDDGWLL
FEHGYDQGVA VRTIMSDLGY QNIMTEQDYA GHDRVTLGQY KTEREA
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