Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1738 |
Symbol | dapA |
ID | 5137321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1859550 |
End bp | 1860428 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533195 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001217677 |
Protein GI | 147673601 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAG GAAGTATCGT TGCGTTAATT ACCCCATTTA CTCCGGACGG TGAAGTCGAT TATATCAGCC TGAAAAAGCT GGTCGATTTC CATGTTGATG CAGGAACCGA TGCGATTGTT TCCGTTGGCA CCACCGGTGA ATCCGCGACG CTAACGGTCG AAGAACACGT GAAAGTAGTA GCAAAAACGG TGGAGTTCGC TGAAGGTCGT CTGCCTATTA TTGCTGGAAC AGGCGCAAAT GCGACCCATG AAGCGGTCAC TTTTAGCCGC CTGCTGAACA ACACAGGTAT TGCAGGGTAT TTGAGTGTCA CGCCTTATTA CAATAAGCCG ACCCAAGAAG GTCTGTTCCT GCACTACAAC GCGATTGCGC AAGAAACCGA TATTCCCGTG ATTTTGTACA ACGTGCCGGG ACGTACCGCT GTGGATATGC GTCCAGAAAC CGTTGCCCGT TTATCTGAAA TCAAGAACAT TGTCGCACTG AAAGATGCAA CCGGTGATTT AAGCCGTGTT GCGAAGCACC GTGAGATGTG TAAAGAAGGT TTTGTCCTAC TCAGCGGTGA TGATGCCACA GGCCTTGAGT TCGTCAAACT CGGGGGGCAA GGTGTGATTT CAGTGACCAA CAATATCGCT GCTGCCGACA TGGCGAAGAT GATGCATTTG GCGCTGGATG GTAAGTTTGA CGAAGCGGCG AGCATCAACC AACGCTTGAT GACACTGCAT AAAAATCTGT TTATCGAATC GAGCCCAATT CCAGTGAAAT GGGCAGCCCA TAAGATGGGA TTGATTGCAA ATGGTGATCT GCGTCTACCT TTGACGCAAC TTTCGGAACC AGCACGCCCA ATCGTTGCCC AAGCCCTGTC TGAAGCCTGT ATTTATTAA
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Protein sequence | MFSGSIVALI TPFTPDGEVD YISLKKLVDF HVDAGTDAIV SVGTTGESAT LTVEEHVKVV AKTVEFAEGR LPIIAGTGAN ATHEAVTFSR LLNNTGIAGY LSVTPYYNKP TQEGLFLHYN AIAQETDIPV ILYNVPGRTA VDMRPETVAR LSEIKNIVAL KDATGDLSRV AKHREMCKEG FVLLSGDDAT GLEFVKLGGQ GVISVTNNIA AADMAKMMHL ALDGKFDEAA SINQRLMTLH KNLFIESSPI PVKWAAHKMG LIANGDLRLP LTQLSEPARP IVAQALSEAC IY
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