Gene VC0395_A1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1733 
Symbol 
ID5135755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1855930 
End bp1856325 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID640533190 
Producthypothetical protein 
Protein accessionYP_001217672 
Protein GI147673991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01617] transcriptional regulator, Spx/MgsR family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC CCATTCAGGC CTTCAATAAA ACCCATTTAA GGATAAACAT GACGATCACT 
TTGTATGGCA TTCCGAACTG CGACACCATG AAAAAAGCCC GTAAATGGCT AGAACAAGCG
GGCGTCGCCT ACCAGTTTCA TGACTATCGC AAAGAGGGCA TTACCCCAGA ATTGGTGGCT
GGATTTTGTA GCCAATTAGG TTGGGAACAA GTACTCAATA AGCGCGGCAC AACCTTTCGC
CAACTGAGTG ATGAGCAAAA AGCCACTTTG AATGCCGACA ATGCAGTGGC ATTGTTAGTA
GAACATCCGG CGATGATTAA GCGCCCTATT TTACAACGTC AAGATGAACT GCATCTTGGC
TTTAGCGATG CCCAGTATCG CGCTCTTTTT TCTTAA
 
Protein sequence
MKQPIQAFNK THLRINMTIT LYGIPNCDTM KKARKWLEQA GVAYQFHDYR KEGITPELVA 
GFCSQLGWEQ VLNKRGTTFR QLSDEQKATL NADNAVALLV EHPAMIKRPI LQRQDELHLG
FSDAQYRALF S