Gene VC0395_A1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1729 
Symbol 
ID5137796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1853435 
End bp1854343 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID640533186 
ProducttyrA protein 
Protein accessionYP_001217668 
Protein GI147674932 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGT CACAGACCGC AATCTTGCCA GAAGCTGGCC CGTTTGCCCT GTACACACTA 
CTGAAAGTTC GTCAGAACCA CGCCCATGTT TTGCAAGCGC TTAAGGCTTT GCCTGCGTTA
GTTGAGGAAA TCAATCAAAA TCAGCCGGGA GCCGAGCTGA CGGTTTCTGT CGCGTTCAGC
AAAGGTTTTT GGAGCCATTT TGAGATGGCG TCGCCACCAG AACTGATTGA TTTTCCTGAG
CTGGGTGAGG GCGAAACTCA CGCGCCAAGC ACGGATGTGG ATGTGTTGAT CCATTGTCAC
GCCACGCGCC ACGATTTGCT GTTTTATACT CTACGTAAAG GGATTAGCGA CATAGCTCAA
GATATTGAAA TCGTGGATGA AACCTATGGT TTCCGTTATT TAGACGCACG TGACATGACG
GGCTTTATTG ATGGCACAGA AAACCCGAAA GCTGAGAAAC GTGCGGAAGT CGCGTTGGTG
GCTGATGGCG ACTTTGCGGG AGGCAGTTAT GTGATGGTAC AACGCTTTGT GCATAATTTG
CCGGCGTGGA ATCGTCTCAA CTTAGCGGCG CAAGAAAAAG TGATTGGTCG CACTAAGCCT
GATTCCGTCG AGCTAGAAAA TGTTCCTGCC GCTTCGCATG TAGGTCGAGT GGATATTAAA
GAAGAAGGTA AAGGATTGAA GATTGTTCGC CACAGCTTGC CGTATGGCAG CGTGAGCGGC
GATCACGGCC TACTGTTTAT TGCGTACTGT CACACGCTGC ATAATTTCAA AACTATGCTG
GAAAGCATGT ACGGTGTCAC TGATGGCAAA ACAGACCAAC TGCTACGCTT TACCAAAGCC
GTGACCGGGG CTTATTTCTT TGCACCGTCG CAAGTGATGT TGCAGGAACT GACACTCAAG
AATCAATAA
 
Protein sequence
MFKSQTAILP EAGPFALYTL LKVRQNHAHV LQALKALPAL VEEINQNQPG AELTVSVAFS 
KGFWSHFEMA SPPELIDFPE LGEGETHAPS TDVDVLIHCH ATRHDLLFYT LRKGISDIAQ
DIEIVDETYG FRYLDARDMT GFIDGTENPK AEKRAEVALV ADGDFAGGSY VMVQRFVHNL
PAWNRLNLAA QEKVIGRTKP DSVELENVPA ASHVGRVDIK EEGKGLKIVR HSLPYGSVSG
DHGLLFIAYC HTLHNFKTML ESMYGVTDGK TDQLLRFTKA VTGAYFFAPS QVMLQELTLK
NQ