Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1729 |
Symbol | |
ID | 5137796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1853435 |
End bp | 1854343 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533186 |
Product | tyrA protein |
Protein accession | YP_001217668 |
Protein GI | 147674932 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGT CACAGACCGC AATCTTGCCA GAAGCTGGCC CGTTTGCCCT GTACACACTA CTGAAAGTTC GTCAGAACCA CGCCCATGTT TTGCAAGCGC TTAAGGCTTT GCCTGCGTTA GTTGAGGAAA TCAATCAAAA TCAGCCGGGA GCCGAGCTGA CGGTTTCTGT CGCGTTCAGC AAAGGTTTTT GGAGCCATTT TGAGATGGCG TCGCCACCAG AACTGATTGA TTTTCCTGAG CTGGGTGAGG GCGAAACTCA CGCGCCAAGC ACGGATGTGG ATGTGTTGAT CCATTGTCAC GCCACGCGCC ACGATTTGCT GTTTTATACT CTACGTAAAG GGATTAGCGA CATAGCTCAA GATATTGAAA TCGTGGATGA AACCTATGGT TTCCGTTATT TAGACGCACG TGACATGACG GGCTTTATTG ATGGCACAGA AAACCCGAAA GCTGAGAAAC GTGCGGAAGT CGCGTTGGTG GCTGATGGCG ACTTTGCGGG AGGCAGTTAT GTGATGGTAC AACGCTTTGT GCATAATTTG CCGGCGTGGA ATCGTCTCAA CTTAGCGGCG CAAGAAAAAG TGATTGGTCG CACTAAGCCT GATTCCGTCG AGCTAGAAAA TGTTCCTGCC GCTTCGCATG TAGGTCGAGT GGATATTAAA GAAGAAGGTA AAGGATTGAA GATTGTTCGC CACAGCTTGC CGTATGGCAG CGTGAGCGGC GATCACGGCC TACTGTTTAT TGCGTACTGT CACACGCTGC ATAATTTCAA AACTATGCTG GAAAGCATGT ACGGTGTCAC TGATGGCAAA ACAGACCAAC TGCTACGCTT TACCAAAGCC GTGACCGGGG CTTATTTCTT TGCACCGTCG CAAGTGATGT TGCAGGAACT GACACTCAAG AATCAATAA
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Protein sequence | MFKSQTAILP EAGPFALYTL LKVRQNHAHV LQALKALPAL VEEINQNQPG AELTVSVAFS KGFWSHFEMA SPPELIDFPE LGEGETHAPS TDVDVLIHCH ATRHDLLFYT LRKGISDIAQ DIEIVDETYG FRYLDARDMT GFIDGTENPK AEKRAEVALV ADGDFAGGSY VMVQRFVHNL PAWNRLNLAA QEKVIGRTKP DSVELENVPA ASHVGRVDIK EEGKGLKIVR HSLPYGSVSG DHGLLFIAYC HTLHNFKTML ESMYGVTDGK TDQLLRFTKA VTGAYFFAPS QVMLQELTLK NQ
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