Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1721 |
Symbol | flrA |
ID | 5135783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1844403 |
End bp | 1845869 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533178 |
Product | flagellar regulatory protein A |
Protein accession | YP_001217660 |
Protein GI | 147675013 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000009386 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGTT TAGCGAAACT ACTTGTGATT GAGGACGATG CCGCGATCCG GCTCAATCTC AGTGTTATTT TAGAATTTGT AGGAGAGCAG TGTGAGGTCA TTGAGTCTAC TCAGATTGAC CAAATCAATT GGTCGGCAGT GTGGGGTGGG TGCATTTTAG GCTCGCTACG TGGTCAAGCG CTTTCTGAAC AATTAATCCA ATCTTTAACC AAGGCTAACC ATATCCCGTT GCTGGTTGCC AATAAGCAGC CTTATTCCTT AGAAGAATTC CCCAACTATG TGGGTGAGTT AGATTTTCCG CTCAACTATC CGCAGCTGAG CGATGCTTTG CGTCACTGTA AAGAATTTCT TGGGCGCAAA GGTTTTCAAG TCCTTGCGAC CGCACGCAAA AACACCCTGT TTCGTAGCCT TGTTGGGCAA AGCATGGGGA TTCAAGAAGT TCGCCACTTG ATTGAGCAAG TCTCGACCAC GGAAGCCAAC GTGCTGATCC TCGGTGAGTC GGGCACGGGT AAAGAAGTGG TTGCGCGTAA CATTCACTAC CATTCAGGAC GCCGTAATGG CCCTTTTGTC CCCATCAACT GTGGTGCAAT CCCGGCTGAA TTGCTGGAAA GTGAACTGTT TGGTCATGAA AAAGGGGCGT TTACCGGAGC GATTACCGCA CGTAAAGGCC GTTTTGAACT GGCTGAAGGC GGCACACTCT TTTTAGATGA AATTGGCGAT ATGCCGATGA GCATGCAGGT TAAACTGCTG CGCGTGCTGC AAGAGCGCTG TTTTGAACGG GTGGGAGGCA ACAGCACCAT CAAAGCGAAT GTGCGCGTGA TTGCCGCAAC GCACCGTAAT TTGGAAGAGA TGATTGACGG ACAGAAATTT CGTGAAGATC TCTACTACCG CTTAAACGTG TTCCCGATTG AAATGCCCGC TCTGCGCGAT CGGATTGATG ACATTCCTTT GCTGTTACAA GAGCTGATGA CTCGTATGGA AGCGGAAGGG GCGCAGCCCA TCTGTTTCAC GCCGCGTGCG ATCAATTCGA TGATGGAGCA TGACTGGCCG GGTAATGTGC GTGAACTTGC CAACTTGGTT GAGCGTATGG TCATCCTGTA TCCAAACAGT TTGGTCGATG TGAATCACCT GCCGACCAAA TACCGTTACA GTGATATTCC GGAATTCCAG CCAGAGCCTA GCCGTTTTAG CTCGGTTGAA GAGCAAGAGC GTGATGTGTT GGAAGGCATT TTTGCAGAAG ACTTTAATTT TGAAGAGCCG CAGGAGTTTG TCCCTGATAT AGATGCGCCG CAAGCGCTGC CACCTGAAGG GGTGAATCTC AAAGAGTTGC TCGCTGATTT AGAAGTGAAC CTCATCAACC AAGCGTTAGA AGCGCAAGGG GGGGTAGTGG CGAGAGCGGC AGACATGCTC GGTATGCGTC GCACCACCTT GGTTGAGAAG ATGCGCAAAT ACAACATGCA ACGCTAG
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Protein sequence | MQSLAKLLVI EDDAAIRLNL SVILEFVGEQ CEVIESTQID QINWSAVWGG CILGSLRGQA LSEQLIQSLT KANHIPLLVA NKQPYSLEEF PNYVGELDFP LNYPQLSDAL RHCKEFLGRK GFQVLATARK NTLFRSLVGQ SMGIQEVRHL IEQVSTTEAN VLILGESGTG KEVVARNIHY HSGRRNGPFV PINCGAIPAE LLESELFGHE KGAFTGAITA RKGRFELAEG GTLFLDEIGD MPMSMQVKLL RVLQERCFER VGGNSTIKAN VRVIAATHRN LEEMIDGQKF REDLYYRLNV FPIEMPALRD RIDDIPLLLQ ELMTRMEAEG AQPICFTPRA INSMMEHDWP GNVRELANLV ERMVILYPNS LVDVNHLPTK YRYSDIPEFQ PEPSRFSSVE EQERDVLEGI FAEDFNFEEP QEFVPDIDAP QALPPEGVNL KELLADLEVN LINQALEAQG GVVARAADML GMRRTTLVEK MRKYNMQR
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