Gene VC0395_A1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1721 
SymbolflrA 
ID5135783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1844403 
End bp1845869 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content50% 
IMG OID640533178 
Productflagellar regulatory protein A 
Protein accessionYP_001217660 
Protein GI147675013 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000009386 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGTT TAGCGAAACT ACTTGTGATT GAGGACGATG CCGCGATCCG GCTCAATCTC 
AGTGTTATTT TAGAATTTGT AGGAGAGCAG TGTGAGGTCA TTGAGTCTAC TCAGATTGAC
CAAATCAATT GGTCGGCAGT GTGGGGTGGG TGCATTTTAG GCTCGCTACG TGGTCAAGCG
CTTTCTGAAC AATTAATCCA ATCTTTAACC AAGGCTAACC ATATCCCGTT GCTGGTTGCC
AATAAGCAGC CTTATTCCTT AGAAGAATTC CCCAACTATG TGGGTGAGTT AGATTTTCCG
CTCAACTATC CGCAGCTGAG CGATGCTTTG CGTCACTGTA AAGAATTTCT TGGGCGCAAA
GGTTTTCAAG TCCTTGCGAC CGCACGCAAA AACACCCTGT TTCGTAGCCT TGTTGGGCAA
AGCATGGGGA TTCAAGAAGT TCGCCACTTG ATTGAGCAAG TCTCGACCAC GGAAGCCAAC
GTGCTGATCC TCGGTGAGTC GGGCACGGGT AAAGAAGTGG TTGCGCGTAA CATTCACTAC
CATTCAGGAC GCCGTAATGG CCCTTTTGTC CCCATCAACT GTGGTGCAAT CCCGGCTGAA
TTGCTGGAAA GTGAACTGTT TGGTCATGAA AAAGGGGCGT TTACCGGAGC GATTACCGCA
CGTAAAGGCC GTTTTGAACT GGCTGAAGGC GGCACACTCT TTTTAGATGA AATTGGCGAT
ATGCCGATGA GCATGCAGGT TAAACTGCTG CGCGTGCTGC AAGAGCGCTG TTTTGAACGG
GTGGGAGGCA ACAGCACCAT CAAAGCGAAT GTGCGCGTGA TTGCCGCAAC GCACCGTAAT
TTGGAAGAGA TGATTGACGG ACAGAAATTT CGTGAAGATC TCTACTACCG CTTAAACGTG
TTCCCGATTG AAATGCCCGC TCTGCGCGAT CGGATTGATG ACATTCCTTT GCTGTTACAA
GAGCTGATGA CTCGTATGGA AGCGGAAGGG GCGCAGCCCA TCTGTTTCAC GCCGCGTGCG
ATCAATTCGA TGATGGAGCA TGACTGGCCG GGTAATGTGC GTGAACTTGC CAACTTGGTT
GAGCGTATGG TCATCCTGTA TCCAAACAGT TTGGTCGATG TGAATCACCT GCCGACCAAA
TACCGTTACA GTGATATTCC GGAATTCCAG CCAGAGCCTA GCCGTTTTAG CTCGGTTGAA
GAGCAAGAGC GTGATGTGTT GGAAGGCATT TTTGCAGAAG ACTTTAATTT TGAAGAGCCG
CAGGAGTTTG TCCCTGATAT AGATGCGCCG CAAGCGCTGC CACCTGAAGG GGTGAATCTC
AAAGAGTTGC TCGCTGATTT AGAAGTGAAC CTCATCAACC AAGCGTTAGA AGCGCAAGGG
GGGGTAGTGG CGAGAGCGGC AGACATGCTC GGTATGCGTC GCACCACCTT GGTTGAGAAG
ATGCGCAAAT ACAACATGCA ACGCTAG
 
Protein sequence
MQSLAKLLVI EDDAAIRLNL SVILEFVGEQ CEVIESTQID QINWSAVWGG CILGSLRGQA 
LSEQLIQSLT KANHIPLLVA NKQPYSLEEF PNYVGELDFP LNYPQLSDAL RHCKEFLGRK
GFQVLATARK NTLFRSLVGQ SMGIQEVRHL IEQVSTTEAN VLILGESGTG KEVVARNIHY
HSGRRNGPFV PINCGAIPAE LLESELFGHE KGAFTGAITA RKGRFELAEG GTLFLDEIGD
MPMSMQVKLL RVLQERCFER VGGNSTIKAN VRVIAATHRN LEEMIDGQKF REDLYYRLNV
FPIEMPALRD RIDDIPLLLQ ELMTRMEAEG AQPICFTPRA INSMMEHDWP GNVRELANLV
ERMVILYPNS LVDVNHLPTK YRYSDIPEFQ PEPSRFSSVE EQERDVLEGI FAEDFNFEEP
QEFVPDIDAP QALPPEGVNL KELLADLEVN LINQALEAQG GVVARAADML GMRRTTLVEK
MRKYNMQR