Gene VC0395_A1711 details

Gene Information

• Locus tag: VC0395_A1711
• ID: 5135519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1833754
• End bp: 1835778
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640533168
• Product: putative flagellar hook-length control protein FliK
• Protein accession: YP_001217650
• Protein GI: 147675428
• COG category: [N] Cell motility
• COG ID: [COG3144] Flagellar hook-length control protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGAGTAG CGAATATGAA TGTGAATCTC ACCCCTCCGG TTGAACCGAG TAAAATAGCT 
CCAACGGCAA AAAGTAGCGC AGTCAGTACG GATGCCGCTG CGACGGAGTC CTCTGGTGGT 
TTTTTTGCGC AGTTACACGC TCTTATTTTC GGCAGCAAAA CCGCTTCAGA TGCCCCCGCT 
ACCAGTGTGA CTCAGACTGA AGGTGACACC GAAGCGCCAG TGAATACAGA GGCAGTCCTA 
GAGGCTGATA GTGATGCCGC TTTAATGGCA GAGATGGATG ACGCCTTGTT TAGCGCCAGC 
GAAGTGGAGG CGGCCAGTGA AGAAGGCTTG CCAGTCGATG TCATAAAATC CGCTCAGAAA 
GCGCCATCAT TAGAAAAAGG TGAAGCGATT TCCACCAAAG TGGCACCAGT CAAGCAAGAT 
GAACAAGGTG CAAATGCGCC CATACCGGCT TCGCTCGCCA AATGGGTCAC GAATGCGGAG 
TCCATCGATG ACCAGCCTGT AAGTGGTGAG TTACAACGCA AAACTGCACA GGCGATGAGT 
GAGGGGGATG AATTATTGGG GCGTTTGCAA GAGGCGAACC AAGCGCTCAT CAAAACCAAC 
GGCAAAATTT TGCCAGCGCA GCATGGTCAA GCATTGGACT CACAACATCC CGACAGAATA 
CGGAACGCGA CGCCGCCTGA AGCGGTTTTA CCGATTGAAT CTGCCACGGC AATCTCCAAT 
CGTGCTCTTT CTACCAGTGC TGACCTTGAT GCTGCCGTCT CAGACTCGGC TGCCACTGAA 
GATGAAATAG CACAAGATGA ATGGATGGCG AGCGCTCTGA TGGGCGGCGC ATTAGTAGGC 
GGATTGTCAG GTGCTTCATT GGCGGCGGCA AACACTGTGC ACGCTGAACC GGTTGAGGGG 
GCAATGCTTG AGGGAATGCC GCTGACACAG ACTTTCGCTA ATACCGCGGC TTTGGCAAGC 
CCAAGCGCCG AAGTGAGTGA GGCTCTTGCG GCTTCAAGTC AAGCGCTGAA AGCGACGCCA 
TTGACTCAAT CAGCGCTCAA TCCTGCATCA ATCATGGCTG ATGAAGGGCT TAATCAGTCA 
ACTTCTGCAA CAGAAACGGG CAAAGTGGTG ATTCCTTGGG GCACACAAAT GCCGACTGAC 
AATGAGTTGG CTGCGCTGAC ACCAGAGCTG AAAGCCATGC TCGAAGAAGG GGGTAAAGCG 
AAAGCGCCTG TTCCTAATGC GCTGGCTCAG TCAGTCGCAC AAGGGTTAAC GCCAGCCCAT 
TTAGCGGCGC AGCAAACGGG CACCACGGCG CTGCCAATGA ATCCCACGGC GGCGACGCCT 
ATCGATATAG CGGCACTAGC GCCTCAAACC GTAGCGGTCA ATCCAATGTT AAATCCTGCC 
GCGACGGTGA ATCCTGAGCT TGCCGCCAGC TCTGCCATGC TGGCAGCATT AGGTGGCCGA 
GCTTTAGCGG GCAGTGACGA ACGTCGTGCG GTCAGTGAAT CAGGACAAGA AGACTTAGCC 
CAGCAAATCG CAGCGGCAGC AGGACAAGGT ACGGCGCAAA ACCAAGCTCT CAACCGCGCT 
GAGTCGCAAC TGGTACAAAC CAATGCTACC CCTGTTCCAT TGAATAAAGA GATGGCTGCC 
GATCAGTTGG CTGAACGTGT GCAGATGATG ATGTCGAAGA ACTTGAAAAA TATTGATATT 
CGGCTGGATC CACCGGAATT GGGACGGATG CATATTCGCA TGAACATGCA AGGTGATGGC 
GCGACCGTGC ATTTCACCGT CGCGAACCAA CACGCACGTG AGGCATTAGA ACAAACCATG 
CCAAGGCTGC GTGAAATGTT GGCGCAGCAA GGCGTCCAAT TGGGCGATAC CTCGGTTCAG 
CAGCAAAGTG CGGGACAACA GCAGCGTTAT ACAGGACAAG AGCAGTCTGG TTTTGGTCAA 
AGCGCACGCA ATGAAAGGCT CAATAGCGAA GAAAACCTTG ATACTGACAT CAAACTTGAT 
TTGAATGTGG CAACAAAGCG TGATGGAATC AGTTATTACG CTTAA 

 

Protein sequence

MRVANMNVNL TPPVEPSKIA PTAKSSAVST DAAATESSGG FFAQLHALIF GSKTASDAPA 
TSVTQTEGDT EAPVNTEAVL EADSDAALMA EMDDALFSAS EVEAASEEGL PVDVIKSAQK 
APSLEKGEAI STKVAPVKQD EQGANAPIPA SLAKWVTNAE SIDDQPVSGE LQRKTAQAMS 
EGDELLGRLQ EANQALIKTN GKILPAQHGQ ALDSQHPDRI RNATPPEAVL PIESATAISN 
RALSTSADLD AAVSDSAATE DEIAQDEWMA SALMGGALVG GLSGASLAAA NTVHAEPVEG 
AMLEGMPLTQ TFANTAALAS PSAEVSEALA ASSQALKATP LTQSALNPAS IMADEGLNQS 
TSATETGKVV IPWGTQMPTD NELAALTPEL KAMLEEGGKA KAPVPNALAQ SVAQGLTPAH 
LAAQQTGTTA LPMNPTAATP IDIAALAPQT VAVNPMLNPA ATVNPELAAS SAMLAALGGR 
ALAGSDERRA VSESGQEDLA QQIAAAAGQG TAQNQALNRA ESQLVQTNAT PVPLNKEMAA 
DQLAERVQMM MSKNLKNIDI RLDPPELGRM HIRMNMQGDG ATVHFTVANQ HAREALEQTM 
PRLREMLAQQ GVQLGDTSVQ QQSAGQQQRY TGQEQSGFGQ SARNERLNSE ENLDTDIKLD 
LNVATKRDGI SYYA