| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1688 |
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| Symbol | |
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| ID | 5137553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1814618 |
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| End bp | 1815496 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533145 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001217627 |
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| Protein GI | 147673570 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000776975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCC GCGCCCTACG CTACTTCGTT GAACTGGTTA ACCAGCAGAG TTTTACCAAA
GCCTCTGAGC GCCTGTTTGT GACTCAGCCA ACCATCAGTA AGATGATCCG TAATTTGGAG
CAGGAGTTAG AACAACCCCT TCTACATCGT GAAGGACGAC GCTTCTGGCT GACTGAAGCC
GGAGAGATTG TCTATCAAAG AGCGCAGCAG ATCTTAACTC AAATGCAGCA ACTGGACGCG
GAACTCACGG ATTTAAACCA ACTGCATCGC GGCCATTTGC GTTTAGGCAT CCCGCCCATG
GTGGGGCATG TTTACGCACG GTTATTTCGT CAATATCGTC AAACGTACCC TAACGTCGAA
TTAACGGTGG TGGAGTATGG CGGACGTAAG ATAGAACAAG CGATCTTAGA CGGTGATATT
GATGTGGCCG TGACCATGCT TTCCCCTAAT CAGCATCCCG ATCTCAATAC GGTTGCCCTC
GATCATTACC CTATTTTTGC CGTGGTCCCC GATATTCCTC TCTGGCGATC ACTCACCACA
CTCACTTGGG CGCAGATCAG CCAAGAGCCT TTCTATCTGT TTACCCATGA ATTTACTCTA
AGTGACCACA TTCATACCTG CTGCCAAGCA GCGGGCTATA CGCCACAAGT CGCCGCGCGC
AGTAGCCAGT GGGATTTTTT GGTGGCATTA GTCAAAAGCG GGGTTGGCGT GTGCTTTCTT
CCAGCGCCGC TTTGTCAAAG GATTCAAGGG GATGGCGTAT TAATCTACCC CATCACACCG
GCTATAGATT GGCGTTTGGG CGTGGTTTGG CATCGCGAAC GTTATGTTTC AAAAACCGCC
GAAGCTTGGA TTGCTTTGTG CCGACGCCAA AACCGATGA
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| Protein sequence | MDIRALRYFV ELVNQQSFTK ASERLFVTQP TISKMIRNLE QELEQPLLHR EGRRFWLTEA
GEIVYQRAQQ ILTQMQQLDA ELTDLNQLHR GHLRLGIPPM VGHVYARLFR QYRQTYPNVE
LTVVEYGGRK IEQAILDGDI DVAVTMLSPN QHPDLNTVAL DHYPIFAVVP DIPLWRSLTT
LTWAQISQEP FYLFTHEFTL SDHIHTCCQA AGYTPQVAAR SSQWDFLVAL VKSGVGVCFL
PAPLCQRIQG DGVLIYPITP AIDWRLGVVW HRERYVSKTA EAWIALCRRQ NR
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