Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1681 |
Symbol | pgm |
ID | 5136240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1809246 |
End bp | 1810892 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533138 |
Product | phosphoglucomutase |
Protein accession | YP_001217620 |
Protein GI | 147674240 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0033] Phosphoglucomutase |
TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000458453 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATGC ACCCTCGTGC TGGACAAAAG GCGCGACAAG AGGATCTCCA TAATATCCCT GCGCTAGTTG CAAATTACTA CCTACTCCAG CCTGAAGCTG GCAATACGGC GCATAAAGTT GAATTTGGTA CGTCGGGACA CCGAGGTACG GCCGATAAAA CTACCTTTAA TGAGCATCAT ATTCTTGCGA TTGCGCAAGC GGTAGCGGAT GTGCGCCATG AACATGGTGT GACTGGCCCA ATCTTTATTG GCAAAGATAC TCATGCGCTG TCTGAACCTG CATTCAGTAG TGTTCTGGAA GTGTTGATTG CCAATGGCAT TGAAGTGATT GTGCAAGAAA ACAACGGTTA CACACCAACG CCGGGCATTT CACACGCTAT TTTAACGTAC AACCTGAAGC ATGCAGATAA AGCGGACGGC ATTGTGATTA CCCCTTCGCA CAACCCGCCA CAAGATGGTG GCATCAAATA CAACCCACCA CACGGTGGCC CGGCGGAAGG GGAGTTAACC CAAGCGATTG AAGATCGTGC CAATGCTTAC ATCAGTCAGC AGCTTGCTGG TGTAAAACGC ATGCCGATTG CGTTGGCTAA ACAATCCGAG TTGCTCAAGC AAGTCGATTT GGTTAAGCCT TACGTTGATG ATCTGGTCAA TGTGGTTGAT ATGGCGGCAA TCCAAAAGGC CAAGCTCAAA ATTGGGGTCG ATCCTCTGGG TGGCAGTGGC ATTGATTACT GGCGTCAAAT TGGCAACGCT TACCAACTCG ATTTAACGCT GGTCAGCGAA GCCATTGATC CAAGCTTCCA ATTCATGTCA TTAGATAAAG ATGGCGTGAT CCGTATGGAT TGCTCTTCTC CATATGCCAT GGCGGGTTTG CTGGCCCTGA AAGATGAATA CGACTTGGCT TTTGGTAACG ATCCTGACTA CGACCGTCAC GGCATTGTGA CCCCTAAAGG CTTGATGAAT CCGAATCACT TCCTCGCGGT GTGCATTGAT TATCTGTACC GTCATCGTCA AGGTTGGGCG GGCCATGTTG CCGTCGGTAA AACGCTGGTT TCCAGTGCGA TGATTGATAA AGTGGTTGCC GATCTTGGCC GCGAACTGTG TGAAGTTCCA GTAGGCTTCA AATGGTTTGT TGATGGGCTC TACTCTGGTC GCTTTGGTTT TGGCGGTGAA GAGAGTGCGG GGGCTTCTTT CCTGCGTCAA GATGGCACGC CTTGGTCTAC CGACAAAGAT GGGATCATTT TGTGCTTACT GGCAGCGGAA ATTACCGCTG TGACCGGCAA AAATCCGCAA CAGTATTATG ATGAATTGGC AGCTAAACAC GGTGATTCTT ATTACAGCCG TATTCAAGCC GTGGCGAATG GTCCACAGAA GAATGTGCTA AAGAAACTGT CTCCTGAAAT GGTGTCGGCT CAAACGCTAG CGGGAGATGC AATTACGGCT CGCTTGACTC ATGCTCCGGG TAATGGCGCA GCCATTGGCG GCCTCAAAGT GACTACGGAT TATGGTTGGT TTGCGGCTCG TCCATCTGGC ACAGAAGATA TCTATAAGAT TTATTGTGAG AGCTTCAAAG GGGCTGAGCA CTTAAAACAA ATTGAATCTG AAGCGCAGCA GATCGTAAAC CAAGTGTTTA AAGACGCGGG TTTATAA
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Protein sequence | MAMHPRAGQK ARQEDLHNIP ALVANYYLLQ PEAGNTAHKV EFGTSGHRGT ADKTTFNEHH ILAIAQAVAD VRHEHGVTGP IFIGKDTHAL SEPAFSSVLE VLIANGIEVI VQENNGYTPT PGISHAILTY NLKHADKADG IVITPSHNPP QDGGIKYNPP HGGPAEGELT QAIEDRANAY ISQQLAGVKR MPIALAKQSE LLKQVDLVKP YVDDLVNVVD MAAIQKAKLK IGVDPLGGSG IDYWRQIGNA YQLDLTLVSE AIDPSFQFMS LDKDGVIRMD CSSPYAMAGL LALKDEYDLA FGNDPDYDRH GIVTPKGLMN PNHFLAVCID YLYRHRQGWA GHVAVGKTLV SSAMIDKVVA DLGRELCEVP VGFKWFVDGL YSGRFGFGGE ESAGASFLRQ DGTPWSTDKD GIILCLLAAE ITAVTGKNPQ QYYDELAAKH GDSYYSRIQA VANGPQKNVL KKLSPEMVSA QTLAGDAITA RLTHAPGNGA AIGGLKVTTD YGWFAARPSG TEDIYKIYCE SFKGAEHLKQ IESEAQQIVN QVFKDAGL
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