| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1622 |
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| Symbol | yqkI |
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| ID | 5136464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1746285 |
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| End bp | 1747730 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533079 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_001217563 |
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| Protein GI | 147675315 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000132012 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACAAG CCCAACAACG CCTGCCAAGT TTGACTCAAG TAATCGTCTC GCTTGGCCTA
TTTTTGCTGT TAGCGTTTTC ATTTACCGCA AAACTGGATT TACCGATCCA ACTGGCTCTG
TATATTGGCT GGTTCGTGAT CATGACGTTA GGTATTCGCC TAGGACATAA ATACAAAGAC
TTAGAAAATG CTGCCCTGAA TGGCATTTCA AATGGTTTAG GCGCAGTGCT GATCTTATTG
GCGGTCGGTG CTCTTGTCGG AACGTGGATT TCCGGCGGTA TTGTGCCAAC CATCATCTAT
TACGGTCTAA AAGCAATTCA CCCTTCTATC TTTTTATTAG CCACTATGGT GATTTGTTCA
TTGACTGCTC TGGCAACGGG AACCTCTTGG GGTGCGGCAG GTACTGCCGG TATTGCCATG
ATGGGGATTG GACAAGGCCT TGGTATTCCA GCGCCTATCA CTGCTGGTGC TGTGCTGTCA
GGCTGTTACT TCGGCGATAA GATGTCTCCC CTGTCTGACT CTGTGATCTT AGCCTCTTCG
ATGTCTAACG TTGAAGTGAT GGAACACATT AAAGGCATGT TACCGATTGC TCTGATCAGC
TATGTGATCA CTGGCATTCT GTTTACTCTG TTTGGTTTCC ATTACGCTGG CAACGTCGAT
ATGTCACAAG TAGAGACGGT CATTGCCGCG ATGGAACAGC AGTTCTACAT CACGCCTTAT
TCTTTCGTGC CTGTGTTGAT TGTGCTTGGT TTGTTGGCAA TGCGTATGCC TTCTTTCCCA
GTGATCAGCT TTGGTTCATT GCTCGGTATC GTTTGGGCTG TGATGATCCA AGATGTCGAT
TTCCTTCAAG CGTTCAACAC CGCATGGGCA CCTTACAATA TTGAATCTGG CGTAAGCTTT
ATTGATGCAA TTCTTAACCG TGGCGGTATG TCATCCATGC TCGGATCGGT TGCGGTTATC
GTCTTCGGTC TTGGTTTTGG TGGTCTGCTC GATAGAGTCG GCGTGCTAGA AACCATCGCC
AAACTGTTCG AGCGCCGAGT CACTAGCCCA GGTTCGCTAG CGACCAGCAC TATCGGTACC
GCCTTTATGG GGAACGTTTT TGGTTCTGCG ATGTATGTAT CACTGATCCT GACCCTAAAA
ATCTGTGCCA AGAACTACGA TCGTTTAGGC TATCAACGTA AGAACTTGTC TCGTAACGCA
GAATTCGGCG GTACACTGAC CTCTGGCATG GTGCCTTGGA GTGATAACGG CATCTATATG
GCGAGCATTT TGGGTGTGGC GACTCTCTCT TATGCACCGT TTATGTGGCT AAGCTTCGTG
TGTATTCTCG TCACTATCAT CACATCTTAC TGTGGTTGGT TTGTCGATAA ATGTGAACCC
ACACAGGCCA TGAATGAACA AGAAGTGACG GCAGAGGAAA TCCAGAAAGC ACCGGCTTCT
GCATAA
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| Protein sequence | MLQAQQRLPS LTQVIVSLGL FLLLAFSFTA KLDLPIQLAL YIGWFVIMTL GIRLGHKYKD
LENAALNGIS NGLGAVLILL AVGALVGTWI SGGIVPTIIY YGLKAIHPSI FLLATMVICS
LTALATGTSW GAAGTAGIAM MGIGQGLGIP APITAGAVLS GCYFGDKMSP LSDSVILASS
MSNVEVMEHI KGMLPIALIS YVITGILFTL FGFHYAGNVD MSQVETVIAA MEQQFYITPY
SFVPVLIVLG LLAMRMPSFP VISFGSLLGI VWAVMIQDVD FLQAFNTAWA PYNIESGVSF
IDAILNRGGM SSMLGSVAVI VFGLGFGGLL DRVGVLETIA KLFERRVTSP GSLATSTIGT
AFMGNVFGSA MYVSLILTLK ICAKNYDRLG YQRKNLSRNA EFGGTLTSGM VPWSDNGIYM
ASILGVATLS YAPFMWLSFV CILVTIITSY CGWFVDKCEP TQAMNEQEVT AEEIQKAPAS
A
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