Gene VC0395_A1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1618 
Symbol 
ID5137579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1739724 
End bp1740599 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content50% 
IMG OID640533075 
Producthypothetical protein 
Protein accessionYP_001217559 
Protein GI147674001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.212959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATGGA TTTTTCTCAC CCTGTTTGCT GCCTTTATGC AAGCATGGCG CAACGCATTC 
CAGAGCCGTT TATCTGGCGA TGTGACAACA GCAGGTGTGA CCCTCGCACG CTTTCTCTGG
GCAAGCCCGA TTGCTGGCGT GTATCTGATC GCACTCTATC AATGGCAACC TGCCGCATTA
CCCACCTTCT CCAGTGCATT TTGGCATTAT GTGGTCGGCG CATCGTTCAT GCAGATCCTG
GCTACCGCGT TAATGGTCAA GCTTTTTAAA TACAACAACT ACGCGGTTGG TGCTGGGCTG
GCTAAAAGCG AAGCTTTGGT GGCTGCAATC TTGGGTATGC TGTTTTTCGG CACTCAACTC
ACGGTATTAG GCTGGCTTGG TGTAGTGATT GGCGGGGTTG GAGTCTTTAT GCTGAGCAGT
CACGGCGGTT TTAAACAGCT TTCACTCCCG ACCGTACTTC TTGGCTTGAG CAGCGGTAGT
GCATTTGCTC TCACTTCACT CTGGGTTCGT GAAGCCAGTC TCGCCTCACA ACTCCCCTTC
CCTTACAGCG CAGCTTGGGT ATTGTTGTTG GTCATCTCGC TGCAAACACT CTGTTTGGTC
GGATACTTGC TCATTAAAGA GAGATCGACC TTGTACAAGC TTTGGCAACG CCCGAAGTTA
GTCATGCTGA CCAGTGTGAG CAGTTGCTTA GGCTCGATAG GTTGGTTTAG CGCCATGTCA
CTGCAAGCCG TGCCTTATGT GAAAACGCTT GGCCAAGTGG AGATCTTTTT CACTATGTTG
ATCTCCATCT TCTGGCTAGG TCAAAAAGTG CGAATTAAAG ATGGATTCGG GCTTATCTTA
GTGGCTCTGG CCGCTATCTT GGTGATGTGG ACCTAA
 
Protein sequence
MTWIFLTLFA AFMQAWRNAF QSRLSGDVTT AGVTLARFLW ASPIAGVYLI ALYQWQPAAL 
PTFSSAFWHY VVGASFMQIL ATALMVKLFK YNNYAVGAGL AKSEALVAAI LGMLFFGTQL
TVLGWLGVVI GGVGVFMLSS HGGFKQLSLP TVLLGLSSGS AFALTSLWVR EASLASQLPF
PYSAAWVLLL VISLQTLCLV GYLLIKERST LYKLWQRPKL VMLTSVSSCL GSIGWFSAMS
LQAVPYVKTL GQVEIFFTML ISIFWLGQKV RIKDGFGLIL VALAAILVMW T