Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1611 |
Symbol | rpmF |
ID | 5135699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1731418 |
End bp | 1731588 |
Gene Length | 171 bp |
Protein Length | 56 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533068 |
Product | 50S ribosomal protein L32 |
Protein accession | YP_001217552 |
Protein GI | 147674886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0333] Ribosomal protein L32 |
TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000123515 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTAC AACAAAACCG TAAAACACGT TCAAGACGTG GCATGCGTCG TTCACACGAT GCGCTAACTG CTGCAGCGCT ATCTGTAGAC GCAACTTCAG GTGAAACTCA CCTGCGCCAC AACGTAACCG CTGAAGGTTA CTACCGTGGT AAAAAGGTTA TCAACAAGTA A
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Protein sequence | MAVQQNRKTR SRRGMRRSHD ALTAAALSVD ATSGETHLRH NVTAEGYYRG KKVINK
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