Gene VC0395_A1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1611 
SymbolrpmF 
ID5135699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1731418 
End bp1731588 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content49% 
IMG OID640533068 
Product50S ribosomal protein L32 
Protein accessionYP_001217552 
Protein GI147674886 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0333] Ribosomal protein L32 
TIGRFAM ID[TIGR01031] ribosomal protein L32 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000123515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTAC AACAAAACCG TAAAACACGT TCAAGACGTG GCATGCGTCG TTCACACGAT 
GCGCTAACTG CTGCAGCGCT ATCTGTAGAC GCAACTTCAG GTGAAACTCA CCTGCGCCAC
AACGTAACCG CTGAAGGTTA CTACCGTGGT AAAAAGGTTA TCAACAAGTA A
 
Protein sequence
MAVQQNRKTR SRRGMRRSHD ALTAAALSVD ATSGETHLRH NVTAEGYYRG KKVINK