Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1605 |
Symbol | fabF |
ID | 5136901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1725867 |
End bp | 1727111 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533062 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | YP_001217546 |
Protein GI | 147673369 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000457499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCAAGC GTCGCGTTGT TGTCACTGGC ATGGGTATGT TGTCACCGGT AGGCAACACT GTAGAGTCAT CTTGGAAAGC CTTGTTGGCC GGCCAAAGCG GCATCGTCAA CATTGAGCAC TTCGACACTA CCAATTTTTC TACTCGTTTC GCAGGCCTGG TAAAAGGTTT TGACTGCGAA CAGTACATGT CAAAAAAAGA TGCTCGCAAA ATGGATTTGT TTATCCAGTA TGGTATCGCT GCGGGCATTC AGGCTTTGGA AGATTCAGGC CTAGAAGTTA ATGAAGAAAA TGCTGCGCGT ATTGGCGTTG CGATTGGTTC GGGTATCGGC GGCCTTGAGC TGATTGAAAC CGGACATCAA GCTTTAATCG AGAAAGGCCC ACGTAAGGTT AGCCCTTTCT TCGTTCCCTC AACTATTGTC AACATGATTG CCGGTAACTT GTCTATCATG CGTGGCTTAC GTGGTCCCAA TATTGCGATC TCTACCGCCT GTACCACGGG CTTGCACAAT ATCGGCCATG CAGCACGTAT GATTGCTTAC GGTGATGCGG ATGCGATGGT TGCAGGTGGT GCAGAAAAAG CGTCAACGCC ACTGGGCATG GCGGGTTTTG GTGCGGCGAA AGCACTCTCA ACTCGTAATG ATGAACCGCA AAAAGCGTCT CGTCCTTGGG ATAAAGACCG TGATGGTTTC GTGCTCGGTG ACGGTGCCGG CATCATGGTG CTTGAAGAGT ACGAACACGC GAAAGCGCGT GGCGCGAAAA TTTACGCAGA AGTGGTTGGC TTCGGTATGT CAGGTGATGC TTATCATATG ACTTCACCGA GTGAAGACGG CTCTGGCGGT GCGCTGGCGA TGGAAGCGGC CATGCGTGAT GCAGGCGTGA CTGGTGAGCA GATTGGTTAT GTTAATGCTC ACGGTACATC TACCCCTGCG GGCGATGTGG CTGAAGTGAA AGGCATTAAA CGTGCGTTGG GTGAAGCAGG GACTAAGCAA GTTCTGGTTT CTTCTACCAA GTCCATGACG GGTCACTTAT TAGGTGCTGC AGGTTCTGTC GAAGCGATCA TCACTGTGAT GTCTTTGGTG GATCAAATGG TTCCACCGAC CATCAATCTG GATAATCCTG AAGAAGGTTT GGGTGTCGAT TTAGTACCGC ATGTTGCCCG TAAAGTTGAG AGTATGGAAT ACGCCATGTG TAACTCGTTT GGCTTTGGTG GTACTAACGG TAGCTTGATT TTCAAGCGCA TGTAA
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Protein sequence | MSKRRVVVTG MGMLSPVGNT VESSWKALLA GQSGIVNIEH FDTTNFSTRF AGLVKGFDCE QYMSKKDARK MDLFIQYGIA AGIQALEDSG LEVNEENAAR IGVAIGSGIG GLELIETGHQ ALIEKGPRKV SPFFVPSTIV NMIAGNLSIM RGLRGPNIAI STACTTGLHN IGHAARMIAY GDADAMVAGG AEKASTPLGM AGFGAAKALS TRNDEPQKAS RPWDKDRDGF VLGDGAGIMV LEEYEHAKAR GAKIYAEVVG FGMSGDAYHM TSPSEDGSGG ALAMEAAMRD AGVTGEQIGY VNAHGTSTPA GDVAEVKGIK RALGEAGTKQ VLVSSTKSMT GHLLGAAGSV EAIITVMSLV DQMVPPTINL DNPEEGLGVD LVPHVARKVE SMEYAMCNSF GFGGTNGSLI FKRM
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