| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1603 |
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| Symbol | |
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| ID | 5136253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1723973 |
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| End bp | 1724989 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533060 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217544 |
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| Protein GI | 147674599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0141578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAAAA AGCGGGTATT GGTGTTGGTT GCTCTGATCG GTATTGTGGC AGGCAGCTAC
TTTTATGTTG TTAAGCAGAT GGATCAGTAT CTGGCTCAGC CTTTGATGAT CCAAGAGGCT
CAGCTCGTCA CGATCGCCTC AGGGACCACT CTCAGTCGAG AGCTGGCCCA GTTAACCGAA
CAAGCTTGGA TCCAAGATAG CTTTGTTGCC GAATGGGTAC GTCGTTTTCA TCCTGAACTC
TCCAAAATTA AGGCAGGAAC TTACAAGCTA CAACCTGATA TGTCTTTAGA GCAGGCTTTG
GCGCTATTGG TTTCTGGTAA AGAGCATCAA TTTTCCATCA CCTTCGTGGA GGGCAGTCGT
TTTCAAGAGT GGCGGGATAT CCTCGCAAGC AACGAAAACA TCACCCAGCA ACTGACGGGT
CTGACTGAAA TCGATATTGC GAAGGCTTTA GGCATTGAGC ATGAAAAGCT GGAAGGTTTG
TTTCTTGCCG AAACGTATCA TTTTACGAAA GGAACCAGCG ATGTAGAGAT CCTCAAACGA
GCTAATCAGA AATTGGAAAA GTTTCTACAA GTGACTTGGG AGCATCGCCA AGAGGGACTG
CCGATCCAGA CGCCTTATGA GGCCTTAATC CTTGCCTCGA TCATTGAAAA AGAAACCTCA
ATTGCCGAGG AACGCGAACG CATTGCGGCC GTTTTCATTA ATCGTTTGAA TAAGCGCATG
CGCTTACAAA CGGATCCAAC GGTGATTTAC GGGATGGGAG AGACCTACGA TGGCAATATC
CGTAAGAAAG ATTTGCGTGC CCGTACACCA TATAACACTT ATGTGATCAA TGGGTTACCT
CCAACGCCTA TCGCAATGCC CGGAGAAGCG TCAATTTATG CCGCACTCAA TCCTGAACAG
AGTGATTATC TTTACTTTGT GGCAAGCGGT GAGGGTGGAC ACAATTTCTC TAAGACACTC
GCAGATCATA ACCGTGCTGT GCGTGCTTAT CTCAAAAAAC TTAGAACAAA ACAATGA
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| Protein sequence | MIKKRVLVLV ALIGIVAGSY FYVVKQMDQY LAQPLMIQEA QLVTIASGTT LSRELAQLTE
QAWIQDSFVA EWVRRFHPEL SKIKAGTYKL QPDMSLEQAL ALLVSGKEHQ FSITFVEGSR
FQEWRDILAS NENITQQLTG LTEIDIAKAL GIEHEKLEGL FLAETYHFTK GTSDVEILKR
ANQKLEKFLQ VTWEHRQEGL PIQTPYEALI LASIIEKETS IAEERERIAA VFINRLNKRM
RLQTDPTVIY GMGETYDGNI RKKDLRARTP YNTYVINGLP PTPIAMPGEA SIYAALNPEQ
SDYLYFVASG EGGHNFSKTL ADHNRAVRAY LKKLRTKQ
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