| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1589 |
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| Symbol | rrmA |
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| ID | 5137657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1708966 |
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| End bp | 1709802 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533046 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_001217530 |
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| Protein GI | 147674072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.972827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGATTG AGACCACCAT GACCTTTTTG TGCCCGCTGT GTGAGCATCC CCTAACGCTA
AACCAAAATA CTTACGCCTG TATCAATCGT CATCAATTTG ATGTAGCGAA AGAGGGGTAC
GTCAATCTGA TGCCTGTTCA GCATAAGCGC TCCAAAGATC CCGGTGATAA CAAAGAGATG
ACACAGGCTC GTCGCCGTTT TTTACACACA GGCCACTACG CGCCCATGCG TGAAAAAGTT
GCCACATTGT GCCAAACCTA TTTAACGGAC CGCCAGCAAA CGCTGCTCGA TATTGGTTGC
GGTGAAGGCT ACTACACCGA TTTTTTTGCC AAGGCTTTGC GCCAGCAAGA CAGTGAAGCA
CAAATTTTTG GGCTCGATAT TTCCAAAATC GCCATACGCT ACGCGGCCAA ACGCTACCCA
GAGTGCCAGT TTGCCGTAGC CTCTAGCCAC CGCTTACCTT TTGCCAATCA GAGTCTGGAT
GGCGTGATCC GTATTTACGC ACCATGCAAA GACACCGAAT TGGAGCGTTG TATCAAAATA
GGCGGCATCG TTATCACCGT CACGCCAGCG GCACGTCACC TGTATCAATT TAAACAAGGC
ATCTACGATC AGGTGCGTTT ACATGAAGAG CAACCAGAAA CTCTGTCGGG TTTTGAATTG
GTTGAAGAGT GTAAACTCCA CTACCCTATG GCACTCAATG GCTCAGAAGC GGCAGACTTG
CTGCAAATGA CTCCGTTTGC TTGGCGTGCC AGTGAGGATT TTAAACACCG TGTTAGTCAA
AGTGATACTT TCGAATGTGA AGCCGATTTT ATGCTCCGAG TGTATCGCAG AAAATAA
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| Protein sequence | MLIETTMTFL CPLCEHPLTL NQNTYACINR HQFDVAKEGY VNLMPVQHKR SKDPGDNKEM
TQARRRFLHT GHYAPMREKV ATLCQTYLTD RQQTLLDIGC GEGYYTDFFA KALRQQDSEA
QIFGLDISKI AIRYAAKRYP ECQFAVASSH RLPFANQSLD GVIRIYAPCK DTELERCIKI
GGIVITVTPA ARHLYQFKQG IYDQVRLHEE QPETLSGFEL VEECKLHYPM ALNGSEAADL
LQMTPFAWRA SEDFKHRVSQ SDTFECEADF MLRVYRRK
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