Gene VC0395_A1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1584 
Symbol 
ID5137909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1704615 
End bp1705058 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content44% 
IMG OID640533041 
Productmethionine sulfoxide reductase B 
Protein accessionYP_001217525 
Protein GI147674517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000628294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGTG AAGCGATAAG TAAAAAGGAA ATAGAAAGGG TGAAATTCGA ATCAAAAGAT 
CTGCACAAGC CTGATGAATA CTGGCGTGAG CACCTGACGG AAGAGGCGTT TTATGTCTGC
CGCCAACAGG GGACAGAAGC ACCATACTCA GGTAAGTTGT TACACAATAA AGACACGGGT
CTTTACCACT GTACCTGTTG CCAAAGCGCT CTGTTTAGCT CTGAAAATAA ATACGATTCG
GGCTGCGGTT GGCCAAGTTT TGATGCGCCG ATTAATGAAC AGGTGATACG CTTTTTGGAT
GACTTTAGTC ACGGAATGGT GCGTACCGAA ATTCGTTGTG CAGCCTGTGA TAGCCACCTT
GGACATGTTT TTGAAGACGG TCCTAAGACG ACAGGATTGA GATTTTGTGT TAACTCGGTG
TCGTTAATTT TCAACAAAAA GTGA
 
Protein sequence
MVSEAISKKE IERVKFESKD LHKPDEYWRE HLTEEAFYVC RQQGTEAPYS GKLLHNKDTG 
LYHCTCCQSA LFSSENKYDS GCGWPSFDAP INEQVIRFLD DFSHGMVRTE IRCAACDSHL
GHVFEDGPKT TGLRFCVNSV SLIFNKK