| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1563 |
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| Symbol | |
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| ID | 5137464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1682343 |
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| End bp | 1683557 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533020 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_001217504 |
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| Protein GI | 147673982 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA TCGGGATGTC GTCAAAACTC GATAATGTCT GCTATGACAT TCGAGGACCA
GTGCTTAAAC ATGCTAAACG CATGGAAGAA GAAGGGCATA AAATACTGAA GCTTAACATC
GGTAACCCTG CCCCGTTTGG TTTCGACGCC CCAGACGAGA TCCTAGTCGA TGTGATCCGT
AACCTACCTA CTTCACAAGG TTACTGTGAC TCGAAAGGCA TTTATTCCGC TCGTAAAGCG
GTGGTGCAGT ACTACCAGAA AAAAGGTATC CGCAGTCTGG ACGTCGAAGA TGTGTACATC
GGCAACGGTG CATCAGAGCT TATCGTGATG GCGATGCAAG CCCTGCTCAA CAATGGCGAT
GAAATGCTGG TACCTGCCCC TGATTACCCA CTGTGGACAG CCGCGGTAGC ACTTTCTGGC
GGCAAAGCCG TGCACTACAT CTGTGATGAA GAAGCCGATT GGTATCCTGA CCTCGACGAT
ATTCGCAGCA AAATCACCCC GAAAACCCGT GGCATTGTGC TGATCAACCC CAATAACCCA
ACCGGTGCGG TTTACAGTCG TGATTTCTTG CTGGAAATCA TCGAGATTGC TCGCAAGCAC
AAGCTGATGA TTTTCGCCGA TGAGATTTAC GACAAAGTGC TGTACGACGG CGCGGTGCAT
ACCTCAATCG CCACCTTAGC GGATGATGTA TTAGTCGTCA CCTTCAACGG CTTATCCAAA
GCTTACCGTG TTTGTGGTTT CCGTGGTGGC TGGATGTTCC TGACTGGCCC CAAACAGCAA
GCACAAGGCT ATATTGCAGG GCTCGATATG CTGGCCTCGA TGCGCTTGTG TGCCAACGTG
CCAATGCAAC ATGCCATTCA AACCGCACTC GGCGGCTATC AAAGTATCAA TGAGCTGATT
TTGCCGGGCG GCCGACTGCT GGAACAGCGT GATCGCGCAT GGGAGCTGAT TAACCAGATC
CCGGGGATTT CTTGCGTGAA GCCAAAAGGC GCGATGTACC TGTTCCCGAA AATTGATACC
AAAATGTATC CGATCAAAGA TGACCAGAAA ATGGTGCTTG ATTTCCTAGT GCAAGAAAAA
GTGCTGCTAG TACAAGGCAG CGGCTTTAAC TGGCCAAAAC CGGATCACTT CCGCATTGTG
ACTCTGCCTC ATGTGGAAGA TCTGGAAATC GCCATCAGTC GCTTTGAACG CTTTATCACG
ACTTACAGCC AATAA
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| Protein sequence | MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIR
NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI GNGASELIVM AMQALLNNGD
EMLVPAPDYP LWTAAVALSG GKAVHYICDE EADWYPDLDD IRSKITPKTR GIVLINPNNP
TGAVYSRDFL LEIIEIARKH KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK
AYRVCGFRGG WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK MVLDFLVQEK
VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT TYSQ
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