| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1511 |
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| Symbol | clpX |
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| ID | 5137919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1624952 |
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| End bp | 1626232 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532969 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001217454 |
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| Protein GI | 147674941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000477229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA AAAGCAAAGA GGGCGGTAGT AGTAAACTGC TGTACTGCTC TTTCTGTGGC
AAAAGCCAGC ACGAAGTTCG CAAACTGATC GCAGGTCCGT CCGTGTATAT TTGTGATGAG
TGCGTTGATT TATGCAACGA CATCATCCGC GAAGAGATCA AAGATGTTCT GCCAAAAAAG
GAATCAGCGG CGTTACCGAC GCCAAGAAAG ATTCGTGAAC ATCTCGACGA TTATGTGATT
GGTCAAGAAC ACGCCAAAAA AGTGCTAGCC GTTGCGGTAT ATAACCACTA CAAGCGTTTA
CGTAATGGTG ATACGACTAG CGAAGGCGTT GAGCTGGGCA AGAGTAACAT TTTGCTGATT
GGCCCAACGG GTAGCGGTAA AACACTACTG GCTGAAACGC TGGCGCGTTT GCTGGATGTG
CCATTTACCA TGGCGGATGC GACCACATTA ACCGAAGCGG GTTATGTGGG CGAAGATGTA
GAAAATATCA TTCAAAAGCT GCTGCAAAAA TGCGATTACG ATGTTGCAAA AGCGGAGCGT
GGTATCGTCT ATATCGATGA AATTGACAAA ATTTCTCGTA AGTCTGAAAA CCCATCCATC
ACACGTGACG TGTCGGGTGA AGGGGTTCAG CAAGCGCTGT TAAAACTGAT TGAAGGTACA
GTTGCTTCGG TTCCACCACA AGGTGGCCGT AAACATCCTC AGCAGGAATT CCTGCAAGTC
GACACCTCAA AAATCCTATT TATCTGTGGT GGCGCGTTTG CTGGCCTAGA TAAAGTGATT
GAACAGCGTG TTGCGACAGG GACTGGTATC GGTTTTGGCG CGGATGTGCG TTCTAAAGAC
AACAGCAAAA CCTTGAGCGA ACTGTTTACT CAGGTTGAAC CTGAAGATTT GGTGAAATAC
GGTTTGATCC CAGAGTTCAT TGGTCGTCTG CCTGTTACGG CAACGCTGAC TGAACTGGAT
GAAGCGGCAT TGATTCAAAT TCTGTGTGAA CCAAAGAATG CACTGACCAA ACAGTATGCG
GCGTTGTTTG AACTGGAAAA CGTTGATCTG GAGTTTCGTG AAGATGCGCT GAAAGCGATT
GCCGCTAAAG CGATGAAGCG TAAAACCGGT GCGCGTGGTC TACGTTCAAT CCTTGAAGCA
GTTCTACTGG AAACCATGTA TGAACTGCCT TCAATGGAAG AGGTCAGCAA GGTGGTGATT
GACGAATCTG TGATCAACGG AGAGTCCGCA CCGCTACTGA TTTACAGCGC TAATGAGAGC
CAAGCCGCTG GTGCGGAGTA A
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| Protein sequence | MTDKSKEGGS SKLLYCSFCG KSQHEVRKLI AGPSVYICDE CVDLCNDIIR EEIKDVLPKK
ESAALPTPRK IREHLDDYVI GQEHAKKVLA VAVYNHYKRL RNGDTTSEGV ELGKSNILLI
GPTGSGKTLL AETLARLLDV PFTMADATTL TEAGYVGEDV ENIIQKLLQK CDYDVAKAER
GIVYIDEIDK ISRKSENPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTSKILFICG GAFAGLDKVI EQRVATGTGI GFGADVRSKD NSKTLSELFT QVEPEDLVKY
GLIPEFIGRL PVTATLTELD EAALIQILCE PKNALTKQYA ALFELENVDL EFREDALKAI
AAKAMKRKTG ARGLRSILEA VLLETMYELP SMEEVSKVVI DESVINGESA PLLIYSANES
QAAGAE
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